Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
MMP2P08253 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
MMP2P08253 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MMP2P08253 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MMP2P08253 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
MMP2P08253 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.79■□□□□ 0.44
MMP2P08253 NUS1P2-201ENST00000417358 873 ntBASIC17.79■□□□□ 0.44
MMP2P08253 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.79■□□□□ 0.44
MMP2P08253 AC103564.2-201ENST00000432853 1299 ntBASIC17.79■□□□□ 0.44
MMP2P08253 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
MMP2P08253 MIR5100-201ENST00000579544 119 ntBASIC17.79■□□□□ 0.44
MMP2P08253 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MMP2P08253 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
MMP2P08253 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.79■□□□□ 0.44
MMP2P08253 AD001527.2-201ENST00000622994 785 ntBASIC17.79■□□□□ 0.44
MMP2P08253 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
MMP2P08253 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.79■□□□□ 0.44
MMP2P08253 AL353593.2-201ENST00000602529 1483 ntBASIC17.79■□□□□ 0.44
MMP2P08253 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.79■□□□□ 0.44
MMP2P08253 AC139713.2-201ENST00000641328 2723 ntBASIC17.79■□□□□ 0.44
MMP2P08253 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MMP2P08253 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.79■□□□□ 0.44
MMP2P08253 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
MMP2P08253 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
MMP2P08253 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
MMP2P08253 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MMP2P08253 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
MMP2P08253 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MMP2P08253 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MMP2P08253 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.78■□□□□ 0.44
MMP2P08253 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
MMP2P08253 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MMP2P08253 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MMP2P08253 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.78■□□□□ 0.44
MMP2P08253 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
MMP2P08253 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.78■□□□□ 0.44
MMP2P08253 AC141586.5-201ENST00000624546 2050 ntBASIC17.78■□□□□ 0.44
MMP2P08253 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.78■□□□□ 0.44
MMP2P08253 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MMP2P08253 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.78■□□□□ 0.44
MMP2P08253 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MMP2P08253 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
MMP2P08253 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
MMP2P08253 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.78■□□□□ 0.44
MMP2P08253 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
MMP2P08253 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.78■□□□□ 0.44
MMP2P08253 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
MMP2P08253 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.78■□□□□ 0.44
MMP2P08253 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.78■□□□□ 0.44
MMP2P08253 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MMP2P08253 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.78■□□□□ 0.44
MMP2P08253 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.78■□□□□ 0.44
MMP2P08253 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.78■□□□□ 0.44
MMP2P08253 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MMP2P08253 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.78■□□□□ 0.44
MMP2P08253 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
MMP2P08253 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MMP2P08253 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MMP2P08253 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MMP2P08253 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
MMP2P08253 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.78■□□□□ 0.44
MMP2P08253 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.78■□□□□ 0.44
MMP2P08253 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.78■□□□□ 0.44
MMP2P08253 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MMP2P08253 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MMP2P08253 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MMP2P08253 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.78■□□□□ 0.44
MMP2P08253 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MMP2P08253 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
MMP2P08253 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MMP2P08253 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
MMP2P08253 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
MMP2P08253 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
MMP2P08253 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MMP2P08253 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
MMP2P08253 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.77■□□□□ 0.44
MMP2P08253 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
MMP2P08253 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MMP2P08253 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
MMP2P08253 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.77■□□□□ 0.44
MMP2P08253 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
MMP2P08253 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MMP2P08253 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MMP2P08253 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
MMP2P08253 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.77■□□□□ 0.44
MMP2P08253 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MMP2P08253 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.77■□□□□ 0.44
MMP2P08253 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.77■□□□□ 0.44
MMP2P08253 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.77■□□□□ 0.44
MMP2P08253 AL139327.4-201ENST00000612362 153 ntBASIC17.77■□□□□ 0.44
MMP2P08253 AC012313.10-201ENST00000623509 926 ntBASIC17.77■□□□□ 0.44
MMP2P08253 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.77■□□□□ 0.44
MMP2P08253 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.77■□□□□ 0.44
MMP2P08253 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MMP2P08253 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MMP2P08253 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MMP2P08253 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
MMP2P08253 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
MMP2P08253 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
MMP2P08253 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms