Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOC3P02656 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOC3P02656 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
APOC3P02656 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.24□□□□□ -0.13
APOC3P02656 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOC3P02656 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOC3P02656 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOC3P02656 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOC3P02656 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOC3P02656 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
APOC3P02656 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
APOC3P02656 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
APOC3P02656 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
APOC3P02656 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOC3P02656 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
APOC3P02656 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOC3P02656 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.24□□□□□ -0.13
APOC3P02656 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOC3P02656 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC14.24□□□□□ -0.13
APOC3P02656 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC14.24□□□□□ -0.13
APOC3P02656 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC14.24□□□□□ -0.13
APOC3P02656 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.24□□□□□ -0.13
APOC3P02656 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOC3P02656 GMCL1P1-201ENST00000463439 1581 ntBASIC14.24□□□□□ -0.13
APOC3P02656 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC14.24□□□□□ -0.13
APOC3P02656 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.24□□□□□ -0.13
APOC3P02656 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.24□□□□□ -0.13
APOC3P02656 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
APOC3P02656 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
APOC3P02656 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOC3P02656 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC14.24□□□□□ -0.13
APOC3P02656 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
APOC3P02656 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOC3P02656 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOC3P02656 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.24□□□□□ -0.13
APOC3P02656 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOC3P02656 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
APOC3P02656 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOC3P02656 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOC3P02656 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC14.24□□□□□ -0.13
APOC3P02656 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.24□□□□□ -0.13
APOC3P02656 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOC3P02656 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.24□□□□□ -0.13
APOC3P02656 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOC3P02656 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOC3P02656 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.24□□□□□ -0.13
APOC3P02656 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOC3P02656 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOC3P02656 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOC3P02656 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOC3P02656 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.23□□□□□ -0.13
APOC3P02656 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOC3P02656 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
APOC3P02656 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
APOC3P02656 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.23□□□□□ -0.13
APOC3P02656 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
APOC3P02656 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
APOC3P02656 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOC3P02656 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOC3P02656 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOC3P02656 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOC3P02656 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOC3P02656 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOC3P02656 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
APOC3P02656 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC14.23□□□□□ -0.13
APOC3P02656 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC14.23□□□□□ -0.13
APOC3P02656 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC14.23□□□□□ -0.13
APOC3P02656 AC068587.9-201ENST00000641814 219 ntBASIC14.23□□□□□ -0.13
APOC3P02656 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.23□□□□□ -0.13
APOC3P02656 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
APOC3P02656 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC14.23□□□□□ -0.13
APOC3P02656 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
APOC3P02656 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOC3P02656 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.23□□□□□ -0.13
APOC3P02656 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
APOC3P02656 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOC3P02656 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOC3P02656 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOC3P02656 GAS2L1P1-201ENST00000420145 1480 ntBASIC14.23□□□□□ -0.13
APOC3P02656 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOC3P02656 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
APOC3P02656 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOC3P02656 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
APOC3P02656 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOC3P02656 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
APOC3P02656 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOC3P02656 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
APOC3P02656 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
APOC3P02656 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
APOC3P02656 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.23□□□□□ -0.13
APOC3P02656 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC14.23□□□□□ -0.13
APOC3P02656 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
APOC3P02656 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOC3P02656 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOC3P02656 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
APOC3P02656 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOC3P02656 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.22□□□□□ -0.13
APOC3P02656 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
APOC3P02656 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
APOC3P02656 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms