Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
KRT6AP02538 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
KRT6AP02538 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
KRT6AP02538 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
KRT6AP02538 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
KRT6AP02538 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT6AP02538 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT6AP02538 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT6AP02538 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
KRT6AP02538 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
KRT6AP02538 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
KRT6AP02538 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
KRT6AP02538 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
KRT6AP02538 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
KRT6AP02538 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
KRT6AP02538 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
KRT6AP02538 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
KRT6AP02538 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
KRT6AP02538 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
KRT6AP02538 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
KRT6AP02538 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.17■□□□□ 0.34
KRT6AP02538 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
KRT6AP02538 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
KRT6AP02538 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
KRT6AP02538 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
KRT6AP02538 IGHGP-201ENST00000390555 1178 ntBASIC17.17■□□□□ 0.34
KRT6AP02538 AC005521.1-201ENST00000393351 872 ntBASIC17.17■□□□□ 0.34
KRT6AP02538 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
KRT6AP02538 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
KRT6AP02538 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
KRT6AP02538 RNF152P1-201ENST00000397754 604 ntBASIC17.17■□□□□ 0.34
KRT6AP02538 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
KRT6AP02538 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
KRT6AP02538 TSPY5P-201ENST00000426936 936 ntBASIC17.17■□□□□ 0.34
KRT6AP02538 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.17■□□□□ 0.34
KRT6AP02538 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
KRT6AP02538 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.17■□□□□ 0.34
KRT6AP02538 AC092597.1-201ENST00000487352 616 ntBASIC17.17■□□□□ 0.34
KRT6AP02538 AC112698.1-201ENST00000510299 916 ntBASIC17.17■□□□□ 0.34
KRT6AP02538 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
KRT6AP02538 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.17■□□□□ 0.34
KRT6AP02538 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
KRT6AP02538 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.17■□□□□ 0.34
KRT6AP02538 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
KRT6AP02538 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.17■□□□□ 0.34
KRT6AP02538 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
KRT6AP02538 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
KRT6AP02538 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
KRT6AP02538 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.17■□□□□ 0.34
KRT6AP02538 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.16■□□□□ 0.34
KRT6AP02538 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
KRT6AP02538 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
KRT6AP02538 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KRT6AP02538 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KRT6AP02538 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
KRT6AP02538 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.16■□□□□ 0.34
KRT6AP02538 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
KRT6AP02538 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KRT6AP02538 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
KRT6AP02538 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
KRT6AP02538 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KRT6AP02538 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.16■□□□□ 0.34
KRT6AP02538 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KRT6AP02538 MIR662-201ENST00000384847 95 ntBASIC17.16■□□□□ 0.34
KRT6AP02538 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
KRT6AP02538 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.16■□□□□ 0.34
KRT6AP02538 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.16■□□□□ 0.34
KRT6AP02538 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.16■□□□□ 0.34
KRT6AP02538 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.16■□□□□ 0.34
KRT6AP02538 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.16■□□□□ 0.34
KRT6AP02538 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.16■□□□□ 0.34
KRT6AP02538 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.16■□□□□ 0.34
KRT6AP02538 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KRT6AP02538 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.16■□□□□ 0.34
KRT6AP02538 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
KRT6AP02538 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
KRT6AP02538 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
KRT6AP02538 AC108860.2-201ENST00000562760 2183 ntBASIC17.16■□□□□ 0.34
KRT6AP02538 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
KRT6AP02538 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.16■□□□□ 0.34
KRT6AP02538 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KRT6AP02538 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
KRT6AP02538 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KRT6AP02538 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KRT6AP02538 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KRT6AP02538 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.16■□□□□ 0.34
KRT6AP02538 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KRT6AP02538 AL353692.3-201ENST00000407031 1396 ntBASIC17.15■□□□□ 0.34
KRT6AP02538 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KRT6AP02538 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KRT6AP02538 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KRT6AP02538 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KRT6AP02538 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
KRT6AP02538 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
KRT6AP02538 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
KRT6AP02538 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KRT6AP02538 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
KRT6AP02538 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
KRT6AP02538 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
KRT6AP02538 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms