Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.63■□□□□ 0.73
CLSTN1O94985 AC008687.5-201ENST00000593746 558 ntBASIC19.63■□□□□ 0.73
CLSTN1O94985 AC083849.1-201ENST00000615227 514 ntBASIC19.63■□□□□ 0.73
CLSTN1O94985 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLSTN1O94985 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLSTN1O94985 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLSTN1O94985 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLSTN1O94985 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLSTN1O94985 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC19.63■□□□□ 0.73
CLSTN1O94985 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLSTN1O94985 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CLSTN1O94985 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC19.63■□□□□ 0.73
CLSTN1O94985 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CLSTN1O94985 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.63■□□□□ 0.73
CLSTN1O94985 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CLSTN1O94985 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC19.63■□□□□ 0.73
CLSTN1O94985 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
CLSTN1O94985 AL024508.2-201ENST00000607749 1894 ntBASIC19.62■□□□□ 0.73
CLSTN1O94985 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
CLSTN1O94985 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLSTN1O94985 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLSTN1O94985 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLSTN1O94985 LINC01126-201ENST00000623515 1646 ntBASIC19.62■□□□□ 0.73
CLSTN1O94985 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLSTN1O94985 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CLSTN1O94985 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.62■□□□□ 0.73
CLSTN1O94985 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CLSTN1O94985 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLSTN1O94985 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CLSTN1O94985 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.62■□□□□ 0.73
CLSTN1O94985 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLSTN1O94985 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CLSTN1O94985 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.62■□□□□ 0.73
CLSTN1O94985 AL645929.1-201ENST00000420084 975 ntBASIC19.62■□□□□ 0.73
CLSTN1O94985 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.62■□□□□ 0.73
CLSTN1O94985 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.62■□□□□ 0.73
CLSTN1O94985 AP003733.1-201ENST00000491725 852 ntBASIC19.62■□□□□ 0.73
CLSTN1O94985 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.62■□□□□ 0.73
CLSTN1O94985 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.62■□□□□ 0.73
CLSTN1O94985 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
CLSTN1O94985 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLSTN1O94985 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CLSTN1O94985 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.62■□□□□ 0.73
CLSTN1O94985 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLSTN1O94985 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
CLSTN1O94985 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLSTN1O94985 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLSTN1O94985 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLSTN1O94985 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLSTN1O94985 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.61■□□□□ 0.73
CLSTN1O94985 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLSTN1O94985 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLSTN1O94985 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLSTN1O94985 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLSTN1O94985 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC19.61■□□□□ 0.73
CLSTN1O94985 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.61■□□□□ 0.73
CLSTN1O94985 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLSTN1O94985 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLSTN1O94985 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLSTN1O94985 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLSTN1O94985 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLSTN1O94985 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLSTN1O94985 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLSTN1O94985 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLSTN1O94985 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLSTN1O94985 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.61■□□□□ 0.73
CLSTN1O94985 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.61■□□□□ 0.73
CLSTN1O94985 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.61■□□□□ 0.73
CLSTN1O94985 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
CLSTN1O94985 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CLSTN1O94985 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CLSTN1O94985 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLSTN1O94985 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLSTN1O94985 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
CLSTN1O94985 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.61■□□□□ 0.73
CLSTN1O94985 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLSTN1O94985 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLSTN1O94985 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLSTN1O94985 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.6■□□□□ 0.73
CLSTN1O94985 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLSTN1O94985 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLSTN1O94985 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC19.6■□□□□ 0.73
CLSTN1O94985 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.6■□□□□ 0.73
CLSTN1O94985 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.6■□□□□ 0.73
CLSTN1O94985 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLSTN1O94985 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLSTN1O94985 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLSTN1O94985 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.6■□□□□ 0.73
CLSTN1O94985 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLSTN1O94985 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CLSTN1O94985 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CLSTN1O94985 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.6■□□□□ 0.73
CLSTN1O94985 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.6■□□□□ 0.73
CLSTN1O94985 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.6■□□□□ 0.73
CLSTN1O94985 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLSTN1O94985 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLSTN1O94985 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CLSTN1O94985 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.6■□□□□ 0.73
CLSTN1O94985 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.6■□□□□ 0.73
CLSTN1O94985 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms