Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC23.24■■□□□ 1.31
LTN1O94822 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
LTN1O94822 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC23.24■■□□□ 1.31
LTN1O94822 AC004461.1-201ENST00000412461 403 ntBASIC23.24■■□□□ 1.31
LTN1O94822 RNF34-208ENST00000555076 593 ntTSL 3 BASIC23.24■■□□□ 1.31
LTN1O94822 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC23.24■■□□□ 1.31
LTN1O94822 AC093512.1-201ENST00000617969 520 ntBASIC23.24■■□□□ 1.31
LTN1O94822 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC23.24■■□□□ 1.31
LTN1O94822 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
LTN1O94822 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC23.24■■□□□ 1.31
LTN1O94822 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
LTN1O94822 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
LTN1O94822 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
LTN1O94822 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC23.24■■□□□ 1.31
LTN1O94822 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
LTN1O94822 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
LTN1O94822 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
LTN1O94822 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
LTN1O94822 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC23.24■■□□□ 1.31
LTN1O94822 SLC25A6P2-201ENST00000497974 877 ntBASIC23.24■■□□□ 1.31
LTN1O94822 AC107918.2-201ENST00000530817 355 ntBASIC23.24■■□□□ 1.31
LTN1O94822 AC009093.7-201ENST00000623853 1223 ntBASIC23.24■■□□□ 1.31
LTN1O94822 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC23.24■■□□□ 1.31
LTN1O94822 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
LTN1O94822 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
LTN1O94822 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
LTN1O94822 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
LTN1O94822 AL135999.2-201ENST00000622438 1686 ntBASIC23.23■■□□□ 1.31
LTN1O94822 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
LTN1O94822 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
LTN1O94822 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
LTN1O94822 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC23.23■■□□□ 1.31
LTN1O94822 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC23.23■■□□□ 1.31
LTN1O94822 ACTL9-202ENST00000612068 1252 ntBASIC23.23■■□□□ 1.31
LTN1O94822 AC106028.4-201ENST00000614509 607 ntBASIC23.23■■□□□ 1.31
LTN1O94822 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
LTN1O94822 FLJ13224-201ENST00000313737 1514 ntBASIC23.23■■□□□ 1.31
LTN1O94822 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC23.23■■□□□ 1.31
LTN1O94822 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
LTN1O94822 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
LTN1O94822 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
LTN1O94822 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC23.23■■□□□ 1.31
LTN1O94822 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
LTN1O94822 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
LTN1O94822 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC23.22■■□□□ 1.31
LTN1O94822 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
LTN1O94822 KRT18P55-202ENST00000578578 1546 ntBASIC23.22■■□□□ 1.31
LTN1O94822 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
LTN1O94822 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
LTN1O94822 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
LTN1O94822 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
LTN1O94822 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC23.22■■□□□ 1.31
LTN1O94822 AC109322.1-201ENST00000524499 1264 ntBASIC23.22■■□□□ 1.31
LTN1O94822 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
LTN1O94822 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
LTN1O94822 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC23.22■■□□□ 1.31
LTN1O94822 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC23.22■■□□□ 1.31
LTN1O94822 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
LTN1O94822 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC23.22■■□□□ 1.31
LTN1O94822 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
LTN1O94822 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC23.22■■□□□ 1.31
LTN1O94822 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC23.22■■□□□ 1.31
LTN1O94822 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
LTN1O94822 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
LTN1O94822 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
LTN1O94822 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC23.22■■□□□ 1.31
LTN1O94822 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
LTN1O94822 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC23.22■■□□□ 1.31
LTN1O94822 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
LTN1O94822 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
LTN1O94822 CCND1-203ENST00000536559 553 ntTSL 3 BASIC23.22■■□□□ 1.31
LTN1O94822 AC011467.4-201ENST00000594891 528 ntBASIC23.22■■□□□ 1.31
LTN1O94822 AL513210.1-201ENST00000629608 234 ntBASIC23.22■■□□□ 1.31
LTN1O94822 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
LTN1O94822 AMT-250ENST00000637682 1823 ntTSL 5 BASIC23.21■■□□□ 1.31
LTN1O94822 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
LTN1O94822 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
LTN1O94822 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC23.21■■□□□ 1.31
LTN1O94822 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
LTN1O94822 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
LTN1O94822 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
LTN1O94822 LINC00304-203ENST00000565008 1864 ntBASIC23.21■■□□□ 1.31
LTN1O94822 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
LTN1O94822 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
LTN1O94822 AC046185.3-201ENST00000623228 1824 ntBASIC23.21■■□□□ 1.31
LTN1O94822 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
LTN1O94822 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
LTN1O94822 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
LTN1O94822 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
LTN1O94822 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
LTN1O94822 FALEC-201ENST00000416894 566 ntTSL 3 BASIC23.21■■□□□ 1.31
LTN1O94822 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
LTN1O94822 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC23.21■■□□□ 1.31
LTN1O94822 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
LTN1O94822 LSM12-202ENST00000585388 942 ntTSL 3 BASIC23.21■■□□□ 1.31
LTN1O94822 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
LTN1O94822 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC23.21■■□□□ 1.31
LTN1O94822 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
LTN1O94822 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
LTN1O94822 REM2-202ENST00000536884 1331 ntTSL 2 BASIC23.2■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms