Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
LRCH4O75427 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRCH4O75427 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRCH4O75427 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.42■□□□□ 0.54
LRCH4O75427 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.42■□□□□ 0.54
LRCH4O75427 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
LRCH4O75427 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
LRCH4O75427 IER3-202ENST00000376377 1350 ntBASIC18.42■□□□□ 0.54
LRCH4O75427 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRCH4O75427 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRCH4O75427 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.41■□□□□ 0.54
LRCH4O75427 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
LRCH4O75427 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.41■□□□□ 0.54
LRCH4O75427 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRCH4O75427 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.41■□□□□ 0.54
LRCH4O75427 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.41■□□□□ 0.54
LRCH4O75427 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRCH4O75427 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
LRCH4O75427 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
LRCH4O75427 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.41■□□□□ 0.54
LRCH4O75427 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRCH4O75427 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.41■□□□□ 0.54
LRCH4O75427 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRCH4O75427 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.41■□□□□ 0.54
LRCH4O75427 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRCH4O75427 AP005901.3-202ENST00000581653 237 ntBASIC18.41■□□□□ 0.54
LRCH4O75427 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.41■□□□□ 0.54
LRCH4O75427 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.41■□□□□ 0.54
LRCH4O75427 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRCH4O75427 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRCH4O75427 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRCH4O75427 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
LRCH4O75427 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRCH4O75427 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRCH4O75427 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRCH4O75427 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.4■□□□□ 0.54
LRCH4O75427 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRCH4O75427 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRCH4O75427 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRCH4O75427 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
LRCH4O75427 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRCH4O75427 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRCH4O75427 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRCH4O75427 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRCH4O75427 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
LRCH4O75427 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
LRCH4O75427 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRCH4O75427 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRCH4O75427 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
LRCH4O75427 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRCH4O75427 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRCH4O75427 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.4■□□□□ 0.54
LRCH4O75427 AP002383.4-201ENST00000442518 975 ntBASIC18.4■□□□□ 0.54
LRCH4O75427 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.4■□□□□ 0.54
LRCH4O75427 TSSC2-201ENST00000450217 709 ntBASIC18.4■□□□□ 0.54
LRCH4O75427 AC002558.1-201ENST00000488906 803 ntBASIC18.4■□□□□ 0.54
LRCH4O75427 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.4■□□□□ 0.54
LRCH4O75427 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.4■□□□□ 0.54
LRCH4O75427 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.4■□□□□ 0.54
LRCH4O75427 KRT18P35-201ENST00000510488 1269 ntBASIC18.4■□□□□ 0.54
LRCH4O75427 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.4■□□□□ 0.54
LRCH4O75427 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.4■□□□□ 0.54
LRCH4O75427 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.4■□□□□ 0.54
LRCH4O75427 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.4■□□□□ 0.54
LRCH4O75427 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
LRCH4O75427 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
LRCH4O75427 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.4■□□□□ 0.54
LRCH4O75427 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.4■□□□□ 0.54
LRCH4O75427 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRCH4O75427 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRCH4O75427 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRCH4O75427 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRCH4O75427 AC020916.1-201ENST00000587762 1774 ntBASIC18.4■□□□□ 0.54
LRCH4O75427 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
LRCH4O75427 AC106820.2-201ENST00000563775 3264 ntBASIC18.4■□□□□ 0.54
LRCH4O75427 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
LRCH4O75427 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
LRCH4O75427 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
LRCH4O75427 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRCH4O75427 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
LRCH4O75427 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
LRCH4O75427 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRCH4O75427 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRCH4O75427 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.39■□□□□ 0.53
LRCH4O75427 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.39■□□□□ 0.53
LRCH4O75427 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRCH4O75427 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LRCH4O75427 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRCH4O75427 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
LRCH4O75427 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRCH4O75427 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.39■□□□□ 0.53
LRCH4O75427 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.39■□□□□ 0.53
LRCH4O75427 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.39■□□□□ 0.53
LRCH4O75427 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LRCH4O75427 AC019129.2-201ENST00000609837 1235 ntBASIC18.39■□□□□ 0.53
LRCH4O75427 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.39■□□□□ 0.53
LRCH4O75427 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRCH4O75427 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
LRCH4O75427 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LRCH4O75427 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms