Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 TSPY6P-201ENST00000448518 926 ntBASIC17.73■□□□□ 0.43
SHOX2O60902 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SHOX2O60902 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.73■□□□□ 0.43
SHOX2O60902 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.73■□□□□ 0.43
SHOX2O60902 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.73■□□□□ 0.43
SHOX2O60902 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SHOX2O60902 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.73■□□□□ 0.43
SHOX2O60902 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SHOX2O60902 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SHOX2O60902 C1R-202ENST00000536053 2347 ntTSL 2 BASIC17.73■□□□□ 0.43
SHOX2O60902 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.73■□□□□ 0.43
SHOX2O60902 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.73■□□□□ 0.43
SHOX2O60902 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SHOX2O60902 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
SHOX2O60902 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.72■□□□□ 0.43
SHOX2O60902 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SHOX2O60902 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SHOX2O60902 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHOX2O60902 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHOX2O60902 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.72■□□□□ 0.43
SHOX2O60902 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SHOX2O60902 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHOX2O60902 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHOX2O60902 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHOX2O60902 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHOX2O60902 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.72■□□□□ 0.43
SHOX2O60902 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.72■□□□□ 0.43
SHOX2O60902 SLC25A1P3-201ENST00000395415 828 ntBASIC17.72■□□□□ 0.43
SHOX2O60902 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.72■□□□□ 0.43
SHOX2O60902 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHOX2O60902 AC097658.1-201ENST00000475555 843 ntBASIC17.72■□□□□ 0.43
SHOX2O60902 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.72■□□□□ 0.43
SHOX2O60902 PNMA6B-201ENST00000538162 1200 ntBASIC17.72■□□□□ 0.43
SHOX2O60902 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.72■□□□□ 0.43
SHOX2O60902 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.72■□□□□ 0.43
SHOX2O60902 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHOX2O60902 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.72■□□□□ 0.43
SHOX2O60902 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.72■□□□□ 0.43
SHOX2O60902 MYC-209ENST00000641252 345 ntBASIC17.72■□□□□ 0.43
SHOX2O60902 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHOX2O60902 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SHOX2O60902 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SHOX2O60902 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHOX2O60902 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHOX2O60902 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHOX2O60902 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHOX2O60902 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHOX2O60902 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.72■□□□□ 0.43
SHOX2O60902 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SHOX2O60902 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.72■□□□□ 0.43
SHOX2O60902 AC022898.2-201ENST00000616822 1312 ntBASIC17.72■□□□□ 0.43
SHOX2O60902 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHOX2O60902 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHOX2O60902 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SHOX2O60902 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.71■□□□□ 0.43
SHOX2O60902 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SHOX2O60902 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SHOX2O60902 AC036111.1-201ENST00000533973 1582 ntBASIC17.71■□□□□ 0.43
SHOX2O60902 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.71■□□□□ 0.43
SHOX2O60902 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHOX2O60902 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHOX2O60902 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.71■□□□□ 0.43
SHOX2O60902 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SHOX2O60902 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHOX2O60902 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SHOX2O60902 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHOX2O60902 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHOX2O60902 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SHOX2O60902 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SHOX2O60902 AL023284.2-201ENST00000405850 579 ntBASIC17.71■□□□□ 0.43
SHOX2O60902 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.71■□□□□ 0.43
SHOX2O60902 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHOX2O60902 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.71■□□□□ 0.43
SHOX2O60902 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.71■□□□□ 0.43
SHOX2O60902 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.71■□□□□ 0.43
SHOX2O60902 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.71■□□□□ 0.43
SHOX2O60902 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.71■□□□□ 0.43
SHOX2O60902 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
SHOX2O60902 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SHOX2O60902 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.71■□□□□ 0.43
SHOX2O60902 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
SHOX2O60902 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
SHOX2O60902 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.71■□□□□ 0.43
SHOX2O60902 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.71■□□□□ 0.43
SHOX2O60902 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
SHOX2O60902 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SHOX2O60902 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.71■□□□□ 0.43
SHOX2O60902 FES-204ENST00000414248 2327 ntTSL 2 BASIC17.71■□□□□ 0.43
SHOX2O60902 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SHOX2O60902 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.71■□□□□ 0.43
SHOX2O60902 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHOX2O60902 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.7■□□□□ 0.42
SHOX2O60902 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.7■□□□□ 0.42
SHOX2O60902 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.7■□□□□ 0.42
SHOX2O60902 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SHOX2O60902 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.7■□□□□ 0.42
SHOX2O60902 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHOX2O60902 AC079328.2-201ENST00000561241 3354 ntBASIC17.7■□□□□ 0.42
SHOX2O60902 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SHOX2O60902 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms