Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 BX276092.7-203ENST00000637198 1536 ntBASIC15.86■□□□□ 0.13
CXCL13O43927 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CXCL13O43927 AC004870.1-201ENST00000315132 882 ntBASIC15.86■□□□□ 0.13
CXCL13O43927 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.86■□□□□ 0.13
CXCL13O43927 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.86■□□□□ 0.13
CXCL13O43927 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.86■□□□□ 0.13
CXCL13O43927 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CXCL13O43927 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CXCL13O43927 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.86■□□□□ 0.13
CXCL13O43927 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.86■□□□□ 0.13
CXCL13O43927 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.86■□□□□ 0.13
CXCL13O43927 EMBP1-201ENST00000458200 901 ntBASIC15.86■□□□□ 0.13
CXCL13O43927 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.86■□□□□ 0.13
CXCL13O43927 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.86■□□□□ 0.13
CXCL13O43927 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.86■□□□□ 0.13
CXCL13O43927 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.86■□□□□ 0.13
CXCL13O43927 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CXCL13O43927 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CXCL13O43927 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.86■□□□□ 0.13
CXCL13O43927 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.86■□□□□ 0.13
CXCL13O43927 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.86■□□□□ 0.13
CXCL13O43927 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CXCL13O43927 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CXCL13O43927 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CXCL13O43927 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
CXCL13O43927 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CXCL13O43927 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.86■□□□□ 0.13
CXCL13O43927 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CXCL13O43927 PODN-203ENST00000395871 2744 ntTSL 5 BASIC15.86■□□□□ 0.13
CXCL13O43927 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CXCL13O43927 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CXCL13O43927 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CXCL13O43927 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CXCL13O43927 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.85■□□□□ 0.13
CXCL13O43927 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC15.85■□□□□ 0.13
CXCL13O43927 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CXCL13O43927 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CXCL13O43927 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CXCL13O43927 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CXCL13O43927 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CXCL13O43927 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.85■□□□□ 0.13
CXCL13O43927 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC15.85■□□□□ 0.13
CXCL13O43927 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
CXCL13O43927 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.85■□□□□ 0.13
CXCL13O43927 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.85■□□□□ 0.13
CXCL13O43927 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CXCL13O43927 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.85■□□□□ 0.13
CXCL13O43927 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.85■□□□□ 0.13
CXCL13O43927 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CXCL13O43927 AC122714.2-201ENST00000502787 707 ntBASIC15.85■□□□□ 0.13
CXCL13O43927 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.85■□□□□ 0.13
CXCL13O43927 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.85■□□□□ 0.13
CXCL13O43927 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.85■□□□□ 0.13
CXCL13O43927 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.85■□□□□ 0.13
CXCL13O43927 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.85■□□□□ 0.13
CXCL13O43927 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CXCL13O43927 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.85■□□□□ 0.13
CXCL13O43927 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.85■□□□□ 0.13
CXCL13O43927 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.85■□□□□ 0.13
CXCL13O43927 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CXCL13O43927 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CXCL13O43927 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CXCL13O43927 RNF165-205ENST00000588679 2904 ntBASIC15.85■□□□□ 0.13
CXCL13O43927 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CXCL13O43927 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CXCL13O43927 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CXCL13O43927 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC15.85■□□□□ 0.13
CXCL13O43927 SIRPAP1-201ENST00000448467 1770 ntBASIC15.85■□□□□ 0.13
CXCL13O43927 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CXCL13O43927 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.85■□□□□ 0.13
CXCL13O43927 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.84■□□□□ 0.13
CXCL13O43927 AC012317.2-201ENST00000623305 2251 ntBASIC15.84■□□□□ 0.13
CXCL13O43927 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
CXCL13O43927 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CXCL13O43927 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC15.84■□□□□ 0.13
CXCL13O43927 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CXCL13O43927 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.84■□□□□ 0.13
CXCL13O43927 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CXCL13O43927 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CXCL13O43927 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CXCL13O43927 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.84■□□□□ 0.13
CXCL13O43927 AKR1C7P-201ENST00000305623 895 ntBASIC15.84■□□□□ 0.13
CXCL13O43927 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CXCL13O43927 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CXCL13O43927 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CXCL13O43927 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CXCL13O43927 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.84■□□□□ 0.13
CXCL13O43927 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.84■□□□□ 0.13
CXCL13O43927 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CXCL13O43927 TPM4P1-201ENST00000436100 807 ntBASIC15.84■□□□□ 0.13
CXCL13O43927 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.84■□□□□ 0.13
CXCL13O43927 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
CXCL13O43927 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.84■□□□□ 0.13
CXCL13O43927 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.84■□□□□ 0.13
CXCL13O43927 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.84■□□□□ 0.13
CXCL13O43927 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.84■□□□□ 0.13
CXCL13O43927 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CXCL13O43927 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CXCL13O43927 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.84■□□□□ 0.13
CXCL13O43927 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms