Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 YBX1P5-201ENST00000509441 847 ntBASIC18.85■□□□□ 0.61
HOXA2O43364 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.85■□□□□ 0.61
HOXA2O43364 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
HOXA2O43364 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
HOXA2O43364 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.85■□□□□ 0.61
HOXA2O43364 C20orf181-201ENST00000623918 480 ntBASIC18.85■□□□□ 0.61
HOXA2O43364 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HOXA2O43364 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HOXA2O43364 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
HOXA2O43364 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
HOXA2O43364 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HOXA2O43364 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HOXA2O43364 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HOXA2O43364 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HOXA2O43364 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HOXA2O43364 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HOXA2O43364 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HOXA2O43364 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
HOXA2O43364 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
HOXA2O43364 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.84■□□□□ 0.61
HOXA2O43364 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXA2O43364 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HOXA2O43364 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.84■□□□□ 0.61
HOXA2O43364 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.84■□□□□ 0.61
HOXA2O43364 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.84■□□□□ 0.61
HOXA2O43364 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
HOXA2O43364 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
HOXA2O43364 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.84■□□□□ 0.61
HOXA2O43364 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.84■□□□□ 0.61
HOXA2O43364 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXA2O43364 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
HOXA2O43364 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXA2O43364 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXA2O43364 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.84■□□□□ 0.61
HOXA2O43364 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
HOXA2O43364 LINC00982-205ENST00000420957 435 ntBASIC18.84■□□□□ 0.61
HOXA2O43364 MKNK2P1-201ENST00000437526 628 ntBASIC18.84■□□□□ 0.61
HOXA2O43364 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.84■□□□□ 0.61
HOXA2O43364 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.84■□□□□ 0.61
HOXA2O43364 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.84■□□□□ 0.61
HOXA2O43364 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.84■□□□□ 0.61
HOXA2O43364 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.84■□□□□ 0.61
HOXA2O43364 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.84■□□□□ 0.61
HOXA2O43364 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HOXA2O43364 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXA2O43364 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXA2O43364 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
HOXA2O43364 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
HOXA2O43364 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.84■□□□□ 0.61
HOXA2O43364 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
HOXA2O43364 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.84■□□□□ 0.61
HOXA2O43364 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.83■□□□□ 0.61
HOXA2O43364 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.83■□□□□ 0.61
HOXA2O43364 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
HOXA2O43364 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HOXA2O43364 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.83■□□□□ 0.61
HOXA2O43364 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HOXA2O43364 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.83■□□□□ 0.61
HOXA2O43364 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HOXA2O43364 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
HOXA2O43364 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.83■□□□□ 0.61
HOXA2O43364 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
HOXA2O43364 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXA2O43364 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXA2O43364 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXA2O43364 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
HOXA2O43364 PTCHD3P3-201ENST00000403073 906 ntBASIC18.83■□□□□ 0.6
HOXA2O43364 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.83■□□□□ 0.6
HOXA2O43364 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HOXA2O43364 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.83■□□□□ 0.6
HOXA2O43364 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HOXA2O43364 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.83■□□□□ 0.6
HOXA2O43364 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXA2O43364 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HOXA2O43364 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.83■□□□□ 0.6
HOXA2O43364 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.83■□□□□ 0.6
HOXA2O43364 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
HOXA2O43364 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.83■□□□□ 0.6
HOXA2O43364 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
HOXA2O43364 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.83■□□□□ 0.6
HOXA2O43364 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HOXA2O43364 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HOXA2O43364 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.83■□□□□ 0.6
HOXA2O43364 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HOXA2O43364 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXA2O43364 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
HOXA2O43364 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HOXA2O43364 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXA2O43364 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.82■□□□□ 0.6
HOXA2O43364 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXA2O43364 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXA2O43364 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXA2O43364 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.82■□□□□ 0.6
HOXA2O43364 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXA2O43364 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXA2O43364 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
HOXA2O43364 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.82■□□□□ 0.6
HOXA2O43364 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.82■□□□□ 0.6
HOXA2O43364 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.82■□□□□ 0.6
HOXA2O43364 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms