Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP3B1O00203 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP3B1O00203 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.91■□□□□ 0.46
AP3B1O00203 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
AP3B1O00203 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP3B1O00203 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
AP3B1O00203 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
AP3B1O00203 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP3B1O00203 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.9■□□□□ 0.46
AP3B1O00203 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
AP3B1O00203 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.9■□□□□ 0.46
AP3B1O00203 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
AP3B1O00203 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
AP3B1O00203 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP3B1O00203 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP3B1O00203 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.9■□□□□ 0.46
AP3B1O00203 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP3B1O00203 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP3B1O00203 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.9■□□□□ 0.46
AP3B1O00203 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
AP3B1O00203 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.9■□□□□ 0.46
AP3B1O00203 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.9■□□□□ 0.46
AP3B1O00203 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP3B1O00203 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP3B1O00203 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.9■□□□□ 0.46
AP3B1O00203 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
AP3B1O00203 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.9■□□□□ 0.46
AP3B1O00203 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.9■□□□□ 0.46
AP3B1O00203 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.9■□□□□ 0.46
AP3B1O00203 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
AP3B1O00203 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.9■□□□□ 0.46
AP3B1O00203 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
AP3B1O00203 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.9■□□□□ 0.46
AP3B1O00203 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.9■□□□□ 0.46
AP3B1O00203 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP3B1O00203 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.9■□□□□ 0.46
AP3B1O00203 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP3B1O00203 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.9■□□□□ 0.46
AP3B1O00203 Z83836.1-201ENST00000624605 1642 ntBASIC17.9■□□□□ 0.46
AP3B1O00203 AC139713.2-201ENST00000641328 2723 ntBASIC17.9■□□□□ 0.46
AP3B1O00203 AC106820.2-201ENST00000563775 3264 ntBASIC17.9■□□□□ 0.46
AP3B1O00203 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
AP3B1O00203 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP3B1O00203 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
AP3B1O00203 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
AP3B1O00203 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.89■□□□□ 0.46
AP3B1O00203 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
AP3B1O00203 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP3B1O00203 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP3B1O00203 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP3B1O00203 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.89■□□□□ 0.45
AP3B1O00203 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.89■□□□□ 0.45
AP3B1O00203 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP3B1O00203 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.89■□□□□ 0.45
AP3B1O00203 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
AP3B1O00203 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
AP3B1O00203 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP3B1O00203 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP3B1O00203 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
AP3B1O00203 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP3B1O00203 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP3B1O00203 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.89■□□□□ 0.45
AP3B1O00203 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.89■□□□□ 0.45
AP3B1O00203 AC104076.2-201ENST00000448912 469 ntBASIC17.89■□□□□ 0.45
AP3B1O00203 AC002558.1-201ENST00000488906 803 ntBASIC17.89■□□□□ 0.45
AP3B1O00203 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.89■□□□□ 0.45
AP3B1O00203 VENTXP5-201ENST00000523979 775 ntBASIC17.89■□□□□ 0.45
AP3B1O00203 AC022616.7-201ENST00000525383 220 ntBASIC17.89■□□□□ 0.45
AP3B1O00203 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.89■□□□□ 0.45
AP3B1O00203 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.89■□□□□ 0.45
AP3B1O00203 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP3B1O00203 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.89■□□□□ 0.45
AP3B1O00203 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP3B1O00203 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.89■□□□□ 0.45
AP3B1O00203 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP3B1O00203 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
AP3B1O00203 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
AP3B1O00203 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP3B1O00203 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.89■□□□□ 0.45
AP3B1O00203 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP3B1O00203 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP3B1O00203 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.88■□□□□ 0.45
AP3B1O00203 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP3B1O00203 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP3B1O00203 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP3B1O00203 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
AP3B1O00203 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP3B1O00203 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
AP3B1O00203 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP3B1O00203 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP3B1O00203 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP3B1O00203 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
AP3B1O00203 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP3B1O00203 COX5BP2-201ENST00000392354 334 ntBASIC17.88■□□□□ 0.45
AP3B1O00203 AL671277.2-201ENST00000458060 996 ntBASIC17.88■□□□□ 0.45
AP3B1O00203 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.88■□□□□ 0.45
AP3B1O00203 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.88■□□□□ 0.45
AP3B1O00203 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.88■□□□□ 0.45
AP3B1O00203 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP3B1O00203 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms