Protein–RNA interactions for Protein: A8MSI8

LYRM9, LYR motif-containing protein 9, humanhuman

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM9A8MSI8 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
LYRM9A8MSI8 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC12.65□□□□□ -0.38
LYRM9A8MSI8 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
LYRM9A8MSI8 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC12.65□□□□□ -0.38
LYRM9A8MSI8 OR6D1P-203ENST00000641209 4860 ntBASIC12.65□□□□□ -0.38
LYRM9A8MSI8 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LYRM9A8MSI8 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LYRM9A8MSI8 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LYRM9A8MSI8 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC12.65□□□□□ -0.38
LYRM9A8MSI8 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
LYRM9A8MSI8 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
LYRM9A8MSI8 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.39
LYRM9A8MSI8 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
LYRM9A8MSI8 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
LYRM9A8MSI8 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LYRM9A8MSI8 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LYRM9A8MSI8 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LYRM9A8MSI8 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
LYRM9A8MSI8 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC12.64□□□□□ -0.39
LYRM9A8MSI8 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
LYRM9A8MSI8 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LYRM9A8MSI8 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
LYRM9A8MSI8 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LYRM9A8MSI8 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LYRM9A8MSI8 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
LYRM9A8MSI8 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC12.64□□□□□ -0.39
LYRM9A8MSI8 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LYRM9A8MSI8 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LYRM9A8MSI8 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LYRM9A8MSI8 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LYRM9A8MSI8 MYCLP1-201ENST00000372451 1075 ntBASIC12.64□□□□□ -0.39
LYRM9A8MSI8 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
LYRM9A8MSI8 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LYRM9A8MSI8 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LYRM9A8MSI8 NUS1P2-201ENST00000417358 873 ntBASIC12.64□□□□□ -0.39
LYRM9A8MSI8 AC111152.3-201ENST00000569699 673 ntBASIC12.64□□□□□ -0.39
LYRM9A8MSI8 AC138894.3-201ENST00000603787 634 ntBASIC12.64□□□□□ -0.39
LYRM9A8MSI8 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC12.64□□□□□ -0.39
LYRM9A8MSI8 LINC01451-201ENST00000623792 534 ntBASIC12.64□□□□□ -0.39
LYRM9A8MSI8 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
LYRM9A8MSI8 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LYRM9A8MSI8 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LYRM9A8MSI8 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LYRM9A8MSI8 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LYRM9A8MSI8 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
LYRM9A8MSI8 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LYRM9A8MSI8 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
LYRM9A8MSI8 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LYRM9A8MSI8 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LYRM9A8MSI8 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC12.64□□□□□ -0.39
LYRM9A8MSI8 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC12.64□□□□□ -0.39
LYRM9A8MSI8 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
LYRM9A8MSI8 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LYRM9A8MSI8 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LYRM9A8MSI8 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC12.64□□□□□ -0.39
LYRM9A8MSI8 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
LYRM9A8MSI8 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC12.63□□□□□ -0.39
LYRM9A8MSI8 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LYRM9A8MSI8 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LYRM9A8MSI8 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC12.63□□□□□ -0.39
LYRM9A8MSI8 ADM-208ENST00000534464 1640 ntTSL 2 BASIC12.63□□□□□ -0.39
LYRM9A8MSI8 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC12.63□□□□□ -0.39
LYRM9A8MSI8 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LYRM9A8MSI8 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LYRM9A8MSI8 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LYRM9A8MSI8 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LYRM9A8MSI8 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LYRM9A8MSI8 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LYRM9A8MSI8 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LYRM9A8MSI8 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
LYRM9A8MSI8 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LYRM9A8MSI8 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LYRM9A8MSI8 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
LYRM9A8MSI8 SRP19-202ENST00000445150 833 ntTSL 2 BASIC12.63□□□□□ -0.39
LYRM9A8MSI8 BET1L-206ENST00000486280 665 ntTSL 3 BASIC12.63□□□□□ -0.39
LYRM9A8MSI8 AC002558.1-201ENST00000488906 803 ntBASIC12.63□□□□□ -0.39
LYRM9A8MSI8 FOSL1P1-201ENST00000511041 816 ntBASIC12.63□□□□□ -0.39
LYRM9A8MSI8 IGHV3-52-201ENST00000519770 353 ntBASIC12.63□□□□□ -0.39
LYRM9A8MSI8 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LYRM9A8MSI8 TPM1-218ENST00000559281 851 ntTSL 5 BASIC12.63□□□□□ -0.39
LYRM9A8MSI8 AC091304.2-201ENST00000564639 760 ntBASIC12.63□□□□□ -0.39
LYRM9A8MSI8 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LYRM9A8MSI8 CLEC4GP1-201ENST00000596555 870 ntBASIC12.63□□□□□ -0.39
LYRM9A8MSI8 AL591684.3-201ENST00000605187 298 ntBASIC12.63□□□□□ -0.39
LYRM9A8MSI8 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC12.63□□□□□ -0.39
LYRM9A8MSI8 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
LYRM9A8MSI8 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LYRM9A8MSI8 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LYRM9A8MSI8 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LYRM9A8MSI8 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC12.63□□□□□ -0.39
LYRM9A8MSI8 AC010460.3-201ENST00000511359 1579 ntBASIC12.63□□□□□ -0.39
LYRM9A8MSI8 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC12.63□□□□□ -0.39
LYRM9A8MSI8 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
LYRM9A8MSI8 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC12.63□□□□□ -0.39
LYRM9A8MSI8 AC008764.6-201ENST00000595909 2069 ntBASIC12.63□□□□□ -0.39
LYRM9A8MSI8 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
LYRM9A8MSI8 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC12.62□□□□□ -0.39
LYRM9A8MSI8 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LYRM9A8MSI8 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LYRM9A8MSI8 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms