Protein–RNA interactions for Protein: A6NNY8

USP27X, Ubiquitin carboxyl-terminal hydrolase 27, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP27XA6NNY8 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
USP27XA6NNY8 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP27XA6NNY8 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP27XA6NNY8 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.12■□□□□ 0.65
USP27XA6NNY8 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
USP27XA6NNY8 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP27XA6NNY8 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP27XA6NNY8 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
USP27XA6NNY8 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP27XA6NNY8 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.12■□□□□ 0.65
USP27XA6NNY8 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP27XA6NNY8 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP27XA6NNY8 MFAP1P1-201ENST00000442257 1255 ntBASIC19.12■□□□□ 0.65
USP27XA6NNY8 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.12■□□□□ 0.65
USP27XA6NNY8 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP27XA6NNY8 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
USP27XA6NNY8 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
USP27XA6NNY8 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
USP27XA6NNY8 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.11■□□□□ 0.65
USP27XA6NNY8 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.11■□□□□ 0.65
USP27XA6NNY8 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.11■□□□□ 0.65
USP27XA6NNY8 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.11■□□□□ 0.65
USP27XA6NNY8 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP27XA6NNY8 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP27XA6NNY8 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP27XA6NNY8 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP27XA6NNY8 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP27XA6NNY8 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.11■□□□□ 0.65
USP27XA6NNY8 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USP27XA6NNY8 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.11■□□□□ 0.65
USP27XA6NNY8 AC022898.2-201ENST00000616822 1312 ntBASIC19.11■□□□□ 0.65
USP27XA6NNY8 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.11■□□□□ 0.65
USP27XA6NNY8 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.11■□□□□ 0.65
USP27XA6NNY8 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP27XA6NNY8 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.11■□□□□ 0.65
USP27XA6NNY8 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP27XA6NNY8 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC19.11■□□□□ 0.65
USP27XA6NNY8 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC19.11■□□□□ 0.65
USP27XA6NNY8 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP27XA6NNY8 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP27XA6NNY8 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC19.11■□□□□ 0.65
USP27XA6NNY8 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USP27XA6NNY8 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP27XA6NNY8 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP27XA6NNY8 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
USP27XA6NNY8 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.1■□□□□ 0.65
USP27XA6NNY8 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP27XA6NNY8 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP27XA6NNY8 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP27XA6NNY8 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
USP27XA6NNY8 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP27XA6NNY8 KRT8P7-201ENST00000533003 1432 ntBASIC19.1■□□□□ 0.65
USP27XA6NNY8 AC016396.2-201ENST00000562575 1417 ntBASIC19.1■□□□□ 0.65
USP27XA6NNY8 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
USP27XA6NNY8 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP27XA6NNY8 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
USP27XA6NNY8 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
USP27XA6NNY8 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
USP27XA6NNY8 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.1■□□□□ 0.65
USP27XA6NNY8 PAUPAR-201ENST00000630360 2965 ntBASIC19.1■□□□□ 0.65
USP27XA6NNY8 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
USP27XA6NNY8 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
USP27XA6NNY8 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP27XA6NNY8 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
USP27XA6NNY8 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.1■□□□□ 0.65
USP27XA6NNY8 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP27XA6NNY8 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.1■□□□□ 0.65
USP27XA6NNY8 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.1■□□□□ 0.65
USP27XA6NNY8 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP27XA6NNY8 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP27XA6NNY8 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
USP27XA6NNY8 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP27XA6NNY8 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC19.1■□□□□ 0.65
USP27XA6NNY8 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP27XA6NNY8 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
USP27XA6NNY8 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP27XA6NNY8 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP27XA6NNY8 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP27XA6NNY8 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP27XA6NNY8 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.09■□□□□ 0.65
USP27XA6NNY8 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
USP27XA6NNY8 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
USP27XA6NNY8 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP27XA6NNY8 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
USP27XA6NNY8 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
USP27XA6NNY8 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
USP27XA6NNY8 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP27XA6NNY8 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP27XA6NNY8 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP27XA6NNY8 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP27XA6NNY8 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
USP27XA6NNY8 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP27XA6NNY8 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.09■□□□□ 0.65
USP27XA6NNY8 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
USP27XA6NNY8 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
USP27XA6NNY8 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
USP27XA6NNY8 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.09■□□□□ 0.65
USP27XA6NNY8 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
USP27XA6NNY8 AC104390.1-201ENST00000555663 520 ntBASIC19.09■□□□□ 0.65
USP27XA6NNY8 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms