Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.51■□□□□ 0.71
TRIM49BA6NDI0 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM49BA6NDI0 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.51■□□□□ 0.71
TRIM49BA6NDI0 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.51■□□□□ 0.71
TRIM49BA6NDI0 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
TRIM49BA6NDI0 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM49BA6NDI0 LYSMD4-203ENST00000378904 2122 ntBASIC19.51■□□□□ 0.71
TRIM49BA6NDI0 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM49BA6NDI0 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM49BA6NDI0 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM49BA6NDI0 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
TRIM49BA6NDI0 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
TRIM49BA6NDI0 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.51■□□□□ 0.71
TRIM49BA6NDI0 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM49BA6NDI0 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.51■□□□□ 0.71
TRIM49BA6NDI0 AL671277.2-201ENST00000458060 996 ntBASIC19.51■□□□□ 0.71
TRIM49BA6NDI0 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.51■□□□□ 0.71
TRIM49BA6NDI0 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM49BA6NDI0 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM49BA6NDI0 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
TRIM49BA6NDI0 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.51■□□□□ 0.71
TRIM49BA6NDI0 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
TRIM49BA6NDI0 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM49BA6NDI0 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM49BA6NDI0 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM49BA6NDI0 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.51■□□□□ 0.71
TRIM49BA6NDI0 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM49BA6NDI0 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM49BA6NDI0 PRORSD1P-202ENST00000563365 2154 ntBASIC19.51■□□□□ 0.71
TRIM49BA6NDI0 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.51■□□□□ 0.71
TRIM49BA6NDI0 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
TRIM49BA6NDI0 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM49BA6NDI0 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
TRIM49BA6NDI0 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM49BA6NDI0 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
TRIM49BA6NDI0 BX276092.7-203ENST00000637198 1536 ntBASIC19.51■□□□□ 0.71
TRIM49BA6NDI0 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
TRIM49BA6NDI0 BCL2-203ENST00000589955 5011 ntBASIC19.5■□□□□ 0.71
TRIM49BA6NDI0 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM49BA6NDI0 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM49BA6NDI0 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM49BA6NDI0 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM49BA6NDI0 AC010460.3-201ENST00000511359 1579 ntBASIC19.5■□□□□ 0.71
TRIM49BA6NDI0 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.5■□□□□ 0.71
TRIM49BA6NDI0 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
TRIM49BA6NDI0 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM49BA6NDI0 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM49BA6NDI0 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
TRIM49BA6NDI0 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM49BA6NDI0 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM49BA6NDI0 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM49BA6NDI0 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.5■□□□□ 0.71
TRIM49BA6NDI0 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.5■□□□□ 0.71
TRIM49BA6NDI0 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.5■□□□□ 0.71
TRIM49BA6NDI0 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.5■□□□□ 0.71
TRIM49BA6NDI0 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.5■□□□□ 0.71
TRIM49BA6NDI0 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.5■□□□□ 0.71
TRIM49BA6NDI0 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
TRIM49BA6NDI0 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM49BA6NDI0 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM49BA6NDI0 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.5■□□□□ 0.71
TRIM49BA6NDI0 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM49BA6NDI0 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM49BA6NDI0 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM49BA6NDI0 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM49BA6NDI0 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM49BA6NDI0 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
TRIM49BA6NDI0 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM49BA6NDI0 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM49BA6NDI0 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
TRIM49BA6NDI0 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM49BA6NDI0 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM49BA6NDI0 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
TRIM49BA6NDI0 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM49BA6NDI0 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM49BA6NDI0 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM49BA6NDI0 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.49■□□□□ 0.71
TRIM49BA6NDI0 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM49BA6NDI0 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.49■□□□□ 0.71
TRIM49BA6NDI0 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM49BA6NDI0 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.49■□□□□ 0.71
TRIM49BA6NDI0 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
TRIM49BA6NDI0 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC19.49■□□□□ 0.71
TRIM49BA6NDI0 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM49BA6NDI0 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
TRIM49BA6NDI0 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM49BA6NDI0 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC19.49■□□□□ 0.71
TRIM49BA6NDI0 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.49■□□□□ 0.71
TRIM49BA6NDI0 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM49BA6NDI0 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM49BA6NDI0 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM49BA6NDI0 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM49BA6NDI0 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM49BA6NDI0 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
TRIM49BA6NDI0 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM49BA6NDI0 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM49BA6NDI0 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.48■□□□□ 0.71
TRIM49BA6NDI0 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM49BA6NDI0 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM49BA6NDI0 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms