Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC14.27□□□□□ -0.12
TCRBV4S1A1TA0A5B7 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14.27□□□□□ -0.12
TCRBV4S1A1TA0A5B7 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TCRBV4S1A1TA0A5B7 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC14.27□□□□□ -0.12
TCRBV4S1A1TA0A5B7 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TCRBV4S1A1TA0A5B7 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
TCRBV4S1A1TA0A5B7 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TCRBV4S1A1TA0A5B7 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TCRBV4S1A1TA0A5B7 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TCRBV4S1A1TA0A5B7 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TCRBV4S1A1TA0A5B7 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TCRBV4S1A1TA0A5B7 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TCRBV4S1A1TA0A5B7 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TCRBV4S1A1TA0A5B7 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC14.27□□□□□ -0.13
TCRBV4S1A1TA0A5B7 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC14.27□□□□□ -0.13
TCRBV4S1A1TA0A5B7 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TCRBV4S1A1TA0A5B7 PPOX-214ENST00000535223 664 ntTSL 3 BASIC14.27□□□□□ -0.13
TCRBV4S1A1TA0A5B7 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TCRBV4S1A1TA0A5B7 LINC01711-201ENST00000598340 967 ntBASIC14.27□□□□□ -0.13
TCRBV4S1A1TA0A5B7 AL390719.2-201ENST00000606993 987 ntBASIC14.27□□□□□ -0.13
TCRBV4S1A1TA0A5B7 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TCRBV4S1A1TA0A5B7 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TCRBV4S1A1TA0A5B7 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TCRBV4S1A1TA0A5B7 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
TCRBV4S1A1TA0A5B7 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TCRBV4S1A1TA0A5B7 PRORSD1P-202ENST00000563365 2154 ntBASIC14.27□□□□□ -0.13
TCRBV4S1A1TA0A5B7 NME9-203ENST00000383180 2133 ntTSL 2 BASIC14.27□□□□□ -0.13
TCRBV4S1A1TA0A5B7 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TCRBV4S1A1TA0A5B7 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TCRBV4S1A1TA0A5B7 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
TCRBV4S1A1TA0A5B7 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TCRBV4S1A1TA0A5B7 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
TCRBV4S1A1TA0A5B7 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC14.27□□□□□ -0.13
TCRBV4S1A1TA0A5B7 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TCRBV4S1A1TA0A5B7 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TCRBV4S1A1TA0A5B7 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TCRBV4S1A1TA0A5B7 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
TCRBV4S1A1TA0A5B7 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TCRBV4S1A1TA0A5B7 AC006116.8-202ENST00000587620 1550 ntBASIC14.26□□□□□ -0.13
TCRBV4S1A1TA0A5B7 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC14.26□□□□□ -0.13
TCRBV4S1A1TA0A5B7 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TCRBV4S1A1TA0A5B7 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TCRBV4S1A1TA0A5B7 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TCRBV4S1A1TA0A5B7 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TCRBV4S1A1TA0A5B7 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
TCRBV4S1A1TA0A5B7 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC14.26□□□□□ -0.13
TCRBV4S1A1TA0A5B7 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TCRBV4S1A1TA0A5B7 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
TCRBV4S1A1TA0A5B7 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
TCRBV4S1A1TA0A5B7 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TCRBV4S1A1TA0A5B7 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TCRBV4S1A1TA0A5B7 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TCRBV4S1A1TA0A5B7 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TCRBV4S1A1TA0A5B7 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC14.26□□□□□ -0.13
TCRBV4S1A1TA0A5B7 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TCRBV4S1A1TA0A5B7 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TCRBV4S1A1TA0A5B7 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TCRBV4S1A1TA0A5B7 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
TCRBV4S1A1TA0A5B7 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TCRBV4S1A1TA0A5B7 IGHGP-201ENST00000390555 1178 ntBASIC14.26□□□□□ -0.13
TCRBV4S1A1TA0A5B7 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC14.26□□□□□ -0.13
TCRBV4S1A1TA0A5B7 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC14.26□□□□□ -0.13
TCRBV4S1A1TA0A5B7 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TCRBV4S1A1TA0A5B7 DRAXINP1-201ENST00000437611 948 ntBASIC14.26□□□□□ -0.13
TCRBV4S1A1TA0A5B7 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC14.26□□□□□ -0.13
TCRBV4S1A1TA0A5B7 TOB2P1-201ENST00000469761 992 ntBASIC14.26□□□□□ -0.13
TCRBV4S1A1TA0A5B7 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TCRBV4S1A1TA0A5B7 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC14.26□□□□□ -0.13
TCRBV4S1A1TA0A5B7 CIB2-208ENST00000560618 804 ntTSL 2 BASIC14.26□□□□□ -0.13
TCRBV4S1A1TA0A5B7 AC111152.3-201ENST00000569699 673 ntBASIC14.26□□□□□ -0.13
TCRBV4S1A1TA0A5B7 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC14.26□□□□□ -0.13
TCRBV4S1A1TA0A5B7 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC14.26□□□□□ -0.13
TCRBV4S1A1TA0A5B7 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TCRBV4S1A1TA0A5B7 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TCRBV4S1A1TA0A5B7 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC14.26□□□□□ -0.13
TCRBV4S1A1TA0A5B7 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TCRBV4S1A1TA0A5B7 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TCRBV4S1A1TA0A5B7 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
TCRBV4S1A1TA0A5B7 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
TCRBV4S1A1TA0A5B7 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TCRBV4S1A1TA0A5B7 AC093010.1-201ENST00000473625 1624 ntBASIC14.26□□□□□ -0.13
TCRBV4S1A1TA0A5B7 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC14.26□□□□□ -0.13
TCRBV4S1A1TA0A5B7 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC14.26□□□□□ -0.13
TCRBV4S1A1TA0A5B7 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
TCRBV4S1A1TA0A5B7 UROS-202ENST00000368778 1556 ntTSL 2 BASIC14.26□□□□□ -0.13
TCRBV4S1A1TA0A5B7 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TCRBV4S1A1TA0A5B7 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TCRBV4S1A1TA0A5B7 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TCRBV4S1A1TA0A5B7 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TCRBV4S1A1TA0A5B7 KRT18P55-202ENST00000578578 1546 ntBASIC14.25□□□□□ -0.13
TCRBV4S1A1TA0A5B7 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TCRBV4S1A1TA0A5B7 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TCRBV4S1A1TA0A5B7 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
TCRBV4S1A1TA0A5B7 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TCRBV4S1A1TA0A5B7 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC14.25□□□□□ -0.13
TCRBV4S1A1TA0A5B7 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TCRBV4S1A1TA0A5B7 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TCRBV4S1A1TA0A5B7 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
TCRBV4S1A1TA0A5B7 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TCRBV4S1A1TA0A5B7 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms