Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
TRBV5-4A0A0C4DH59 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV5-4A0A0C4DH59 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV5-4A0A0C4DH59 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.39■□□□□ 0.37
TRBV5-4A0A0C4DH59 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.38■□□□□ 0.37
TRBV5-4A0A0C4DH59 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV5-4A0A0C4DH59 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV5-4A0A0C4DH59 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV5-4A0A0C4DH59 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TRBV5-4A0A0C4DH59 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.38■□□□□ 0.37
TRBV5-4A0A0C4DH59 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.38■□□□□ 0.37
TRBV5-4A0A0C4DH59 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV5-4A0A0C4DH59 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.38■□□□□ 0.37
TRBV5-4A0A0C4DH59 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
TRBV5-4A0A0C4DH59 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV5-4A0A0C4DH59 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV5-4A0A0C4DH59 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TRBV5-4A0A0C4DH59 LETM1P2-201ENST00000597330 2178 ntBASIC17.38■□□□□ 0.37
TRBV5-4A0A0C4DH59 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV5-4A0A0C4DH59 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV5-4A0A0C4DH59 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.38■□□□□ 0.37
TRBV5-4A0A0C4DH59 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.38■□□□□ 0.37
TRBV5-4A0A0C4DH59 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV5-4A0A0C4DH59 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV5-4A0A0C4DH59 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.38■□□□□ 0.37
TRBV5-4A0A0C4DH59 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.38■□□□□ 0.37
TRBV5-4A0A0C4DH59 ABCD1P5-201ENST00000445663 754 ntBASIC17.38■□□□□ 0.37
TRBV5-4A0A0C4DH59 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.38■□□□□ 0.37
TRBV5-4A0A0C4DH59 KRT18P31-201ENST00000506277 1292 ntBASIC17.38■□□□□ 0.37
TRBV5-4A0A0C4DH59 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.38■□□□□ 0.37
TRBV5-4A0A0C4DH59 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.38■□□□□ 0.37
TRBV5-4A0A0C4DH59 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.38■□□□□ 0.37
TRBV5-4A0A0C4DH59 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.38■□□□□ 0.37
TRBV5-4A0A0C4DH59 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
TRBV5-4A0A0C4DH59 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.38■□□□□ 0.37
TRBV5-4A0A0C4DH59 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.38■□□□□ 0.37
TRBV5-4A0A0C4DH59 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TRBV5-4A0A0C4DH59 CLEC4GP1-201ENST00000596555 870 ntBASIC17.38■□□□□ 0.37
TRBV5-4A0A0C4DH59 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.38■□□□□ 0.37
TRBV5-4A0A0C4DH59 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV5-4A0A0C4DH59 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
TRBV5-4A0A0C4DH59 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV5-4A0A0C4DH59 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV5-4A0A0C4DH59 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
TRBV5-4A0A0C4DH59 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV5-4A0A0C4DH59 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV5-4A0A0C4DH59 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.38■□□□□ 0.37
TRBV5-4A0A0C4DH59 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV5-4A0A0C4DH59 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.38■□□□□ 0.37
TRBV5-4A0A0C4DH59 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.37■□□□□ 0.37
TRBV5-4A0A0C4DH59 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV5-4A0A0C4DH59 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.37■□□□□ 0.37
TRBV5-4A0A0C4DH59 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV5-4A0A0C4DH59 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV5-4A0A0C4DH59 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV5-4A0A0C4DH59 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TRBV5-4A0A0C4DH59 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV5-4A0A0C4DH59 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV5-4A0A0C4DH59 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV5-4A0A0C4DH59 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV5-4A0A0C4DH59 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.37■□□□□ 0.37
TRBV5-4A0A0C4DH59 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV5-4A0A0C4DH59 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.37■□□□□ 0.37
TRBV5-4A0A0C4DH59 KRT18P56-201ENST00000507275 550 ntBASIC17.37■□□□□ 0.37
TRBV5-4A0A0C4DH59 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.37■□□□□ 0.37
TRBV5-4A0A0C4DH59 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.37■□□□□ 0.37
TRBV5-4A0A0C4DH59 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
TRBV5-4A0A0C4DH59 AL121772.3-201ENST00000610840 674 ntBASIC17.37■□□□□ 0.37
TRBV5-4A0A0C4DH59 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TRBV5-4A0A0C4DH59 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.37■□□□□ 0.37
TRBV5-4A0A0C4DH59 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV5-4A0A0C4DH59 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV5-4A0A0C4DH59 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV5-4A0A0C4DH59 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.37■□□□□ 0.37
TRBV5-4A0A0C4DH59 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV5-4A0A0C4DH59 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV5-4A0A0C4DH59 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.37■□□□□ 0.37
TRBV5-4A0A0C4DH59 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.37■□□□□ 0.37
TRBV5-4A0A0C4DH59 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV5-4A0A0C4DH59 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TRBV5-4A0A0C4DH59 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.36■□□□□ 0.37
TRBV5-4A0A0C4DH59 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV5-4A0A0C4DH59 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.36■□□□□ 0.37
TRBV5-4A0A0C4DH59 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TRBV5-4A0A0C4DH59 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV5-4A0A0C4DH59 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TRBV5-4A0A0C4DH59 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TRBV5-4A0A0C4DH59 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
TRBV5-4A0A0C4DH59 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV5-4A0A0C4DH59 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
TRBV5-4A0A0C4DH59 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.36■□□□□ 0.37
TRBV5-4A0A0C4DH59 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV5-4A0A0C4DH59 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.36■□□□□ 0.37
TRBV5-4A0A0C4DH59 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV5-4A0A0C4DH59 AC003669.1-201ENST00000334569 611 ntBASIC17.36■□□□□ 0.37
TRBV5-4A0A0C4DH59 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.36■□□□□ 0.37
TRBV5-4A0A0C4DH59 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.36■□□□□ 0.37
TRBV5-4A0A0C4DH59 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV5-4A0A0C4DH59 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.36■□□□□ 0.37
TRBV5-4A0A0C4DH59 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms