Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV1A0A0A0MS02 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC12.9□□□□□ -0.34
TRGV1A0A0A0MS02 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV1A0A0A0MS02 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRGV1A0A0A0MS02 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
TRGV1A0A0A0MS02 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
TRGV1A0A0A0MS02 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
TRGV1A0A0A0MS02 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
TRGV1A0A0A0MS02 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
TRGV1A0A0A0MS02 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC12.9□□□□□ -0.35
TRGV1A0A0A0MS02 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
TRGV1A0A0A0MS02 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC12.89□□□□□ -0.35
TRGV1A0A0A0MS02 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC12.89□□□□□ -0.35
TRGV1A0A0A0MS02 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRGV1A0A0A0MS02 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRGV1A0A0A0MS02 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRGV1A0A0A0MS02 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC12.89□□□□□ -0.35
TRGV1A0A0A0MS02 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRGV1A0A0A0MS02 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRGV1A0A0A0MS02 LINC01311-201ENST00000565162 1445 ntBASIC12.89□□□□□ -0.35
TRGV1A0A0A0MS02 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRGV1A0A0A0MS02 AC100803.2-201ENST00000562459 1963 ntBASIC12.89□□□□□ -0.35
TRGV1A0A0A0MS02 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC12.89□□□□□ -0.35
TRGV1A0A0A0MS02 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
TRGV1A0A0A0MS02 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRGV1A0A0A0MS02 GNE-204ENST00000539208 2190 ntTSL 2 BASIC12.89□□□□□ -0.35
TRGV1A0A0A0MS02 LETM1P2-201ENST00000597330 2178 ntBASIC12.89□□□□□ -0.35
TRGV1A0A0A0MS02 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRGV1A0A0A0MS02 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC12.89□□□□□ -0.35
TRGV1A0A0A0MS02 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRGV1A0A0A0MS02 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRGV1A0A0A0MS02 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRGV1A0A0A0MS02 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRGV1A0A0A0MS02 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRGV1A0A0A0MS02 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC12.89□□□□□ -0.35
TRGV1A0A0A0MS02 KRT18P65-201ENST00000439811 1286 ntBASIC12.89□□□□□ -0.35
TRGV1A0A0A0MS02 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC12.89□□□□□ -0.35
TRGV1A0A0A0MS02 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRGV1A0A0A0MS02 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC12.89□□□□□ -0.35
TRGV1A0A0A0MS02 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
TRGV1A0A0A0MS02 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
TRGV1A0A0A0MS02 AC004263.2-201ENST00000617183 678 ntBASIC12.89□□□□□ -0.35
TRGV1A0A0A0MS02 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRGV1A0A0A0MS02 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC12.89□□□□□ -0.35
TRGV1A0A0A0MS02 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRGV1A0A0A0MS02 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRGV1A0A0A0MS02 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRGV1A0A0A0MS02 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC12.89□□□□□ -0.35
TRGV1A0A0A0MS02 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRGV1A0A0A0MS02 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
TRGV1A0A0A0MS02 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRGV1A0A0A0MS02 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC12.89□□□□□ -0.35
TRGV1A0A0A0MS02 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRGV1A0A0A0MS02 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRGV1A0A0A0MS02 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRGV1A0A0A0MS02 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC12.89□□□□□ -0.35
TRGV1A0A0A0MS02 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRGV1A0A0A0MS02 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRGV1A0A0A0MS02 ACE-204ENST00000428043 5120 ntTSL 2 BASIC12.89□□□□□ -0.35
TRGV1A0A0A0MS02 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC12.89□□□□□ -0.35
TRGV1A0A0A0MS02 EML3-217ENST00000531557 2509 ntTSL 5 BASIC12.89□□□□□ -0.35
TRGV1A0A0A0MS02 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRGV1A0A0A0MS02 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRGV1A0A0A0MS02 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV1A0A0A0MS02 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV1A0A0A0MS02 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV1A0A0A0MS02 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV1A0A0A0MS02 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV1A0A0A0MS02 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV1A0A0A0MS02 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV1A0A0A0MS02 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC12.88□□□□□ -0.35
TRGV1A0A0A0MS02 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC12.88□□□□□ -0.35
TRGV1A0A0A0MS02 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC12.88□□□□□ -0.35
TRGV1A0A0A0MS02 PODN-203ENST00000395871 2744 ntTSL 5 BASIC12.88□□□□□ -0.35
TRGV1A0A0A0MS02 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV1A0A0A0MS02 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV1A0A0A0MS02 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV1A0A0A0MS02 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV1A0A0A0MS02 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV1A0A0A0MS02 RCN1P1-201ENST00000400413 996 ntBASIC12.88□□□□□ -0.35
TRGV1A0A0A0MS02 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV1A0A0A0MS02 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC12.88□□□□□ -0.35
TRGV1A0A0A0MS02 AC104076.2-201ENST00000448912 469 ntBASIC12.88□□□□□ -0.35
TRGV1A0A0A0MS02 KRT18P21-201ENST00000515767 1272 ntBASIC12.88□□□□□ -0.35
TRGV1A0A0A0MS02 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC12.88□□□□□ -0.35
TRGV1A0A0A0MS02 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC12.88□□□□□ -0.35
TRGV1A0A0A0MS02 RBM42-202ENST00000586618 771 ntTSL 3 BASIC12.88□□□□□ -0.35
TRGV1A0A0A0MS02 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV1A0A0A0MS02 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV1A0A0A0MS02 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
TRGV1A0A0A0MS02 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV1A0A0A0MS02 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV1A0A0A0MS02 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV1A0A0A0MS02 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC12.88□□□□□ -0.35
TRGV1A0A0A0MS02 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV1A0A0A0MS02 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV1A0A0A0MS02 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
TRGV1A0A0A0MS02 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV1A0A0A0MS02 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRGV1A0A0A0MS02 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms