Protein–RNA interactions for Protein: A0A087WWA1

LOC110117498, Uncharacterized protein, humanhuman

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC110117498A0A087WWA1 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LOC110117498A0A087WWA1 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
LOC110117498A0A087WWA1 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
LOC110117498A0A087WWA1 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC10.83□□□□□ -0.68
LOC110117498A0A087WWA1 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC10.83□□□□□ -0.68
LOC110117498A0A087WWA1 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
LOC110117498A0A087WWA1 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LOC110117498A0A087WWA1 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LOC110117498A0A087WWA1 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC10.83□□□□□ -0.68
LOC110117498A0A087WWA1 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
LOC110117498A0A087WWA1 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LOC110117498A0A087WWA1 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LOC110117498A0A087WWA1 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LOC110117498A0A087WWA1 KRT18P11-201ENST00000435214 1283 ntBASIC10.83□□□□□ -0.68
LOC110117498A0A087WWA1 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC10.83□□□□□ -0.68
LOC110117498A0A087WWA1 TRIR-205ENST00000592273 783 ntTSL 3 BASIC10.83□□□□□ -0.68
LOC110117498A0A087WWA1 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LOC110117498A0A087WWA1 OR10C1-204ENST00000622521 1039 ntBASIC10.83□□□□□ -0.68
LOC110117498A0A087WWA1 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LOC110117498A0A087WWA1 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LOC110117498A0A087WWA1 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC10.83□□□□□ -0.68
LOC110117498A0A087WWA1 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LOC110117498A0A087WWA1 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC10.83□□□□□ -0.68
LOC110117498A0A087WWA1 FAM45BP-202ENST00000592932 1624 ntBASIC10.83□□□□□ -0.68
LOC110117498A0A087WWA1 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC10.83□□□□□ -0.68
LOC110117498A0A087WWA1 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LOC110117498A0A087WWA1 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LOC110117498A0A087WWA1 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LOC110117498A0A087WWA1 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LOC110117498A0A087WWA1 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LOC110117498A0A087WWA1 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LOC110117498A0A087WWA1 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
LOC110117498A0A087WWA1 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
LOC110117498A0A087WWA1 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
LOC110117498A0A087WWA1 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
LOC110117498A0A087WWA1 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LOC110117498A0A087WWA1 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
LOC110117498A0A087WWA1 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
LOC110117498A0A087WWA1 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
LOC110117498A0A087WWA1 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LOC110117498A0A087WWA1 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LOC110117498A0A087WWA1 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
LOC110117498A0A087WWA1 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
LOC110117498A0A087WWA1 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC10.82□□□□□ -0.68
LOC110117498A0A087WWA1 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LOC110117498A0A087WWA1 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC10.82□□□□□ -0.68
LOC110117498A0A087WWA1 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LOC110117498A0A087WWA1 LINC02012-201ENST00000608206 1725 ntBASIC10.82□□□□□ -0.68
LOC110117498A0A087WWA1 MYB-201ENST00000316528 3571 ntTSL 5 BASIC10.82□□□□□ -0.68
LOC110117498A0A087WWA1 MYB-241ENST00000616088 3573 ntTSL 5 BASIC10.82□□□□□ -0.68
LOC110117498A0A087WWA1 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LOC110117498A0A087WWA1 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LOC110117498A0A087WWA1 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
LOC110117498A0A087WWA1 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC10.82□□□□□ -0.68
LOC110117498A0A087WWA1 CNN2P6-201ENST00000439038 900 ntBASIC10.82□□□□□ -0.68
LOC110117498A0A087WWA1 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LOC110117498A0A087WWA1 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC10.82□□□□□ -0.68
LOC110117498A0A087WWA1 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LOC110117498A0A087WWA1 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LOC110117498A0A087WWA1 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC10.82□□□□□ -0.68
LOC110117498A0A087WWA1 AL121829.2-201ENST00000620908 328 ntBASIC10.82□□□□□ -0.68
LOC110117498A0A087WWA1 AC006557.6-201ENST00000623071 864 ntBASIC10.82□□□□□ -0.68
LOC110117498A0A087WWA1 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LOC110117498A0A087WWA1 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LOC110117498A0A087WWA1 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
LOC110117498A0A087WWA1 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
LOC110117498A0A087WWA1 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
LOC110117498A0A087WWA1 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
LOC110117498A0A087WWA1 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
LOC110117498A0A087WWA1 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LOC110117498A0A087WWA1 VILL-207ENST00000465644 1857 ntTSL 5 BASIC10.82□□□□□ -0.68
LOC110117498A0A087WWA1 AL163051.1-201ENST00000569214 1512 ntBASIC10.82□□□□□ -0.68
LOC110117498A0A087WWA1 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
LOC110117498A0A087WWA1 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LOC110117498A0A087WWA1 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC10.82□□□□□ -0.68
LOC110117498A0A087WWA1 KRT8P9-201ENST00000558927 1449 ntBASIC10.82□□□□□ -0.68
LOC110117498A0A087WWA1 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC10.82□□□□□ -0.68
LOC110117498A0A087WWA1 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC10.82□□□□□ -0.68
LOC110117498A0A087WWA1 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LOC110117498A0A087WWA1 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC10.82□□□□□ -0.68
LOC110117498A0A087WWA1 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LOC110117498A0A087WWA1 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LOC110117498A0A087WWA1 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LOC110117498A0A087WWA1 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LOC110117498A0A087WWA1 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
LOC110117498A0A087WWA1 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LOC110117498A0A087WWA1 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
LOC110117498A0A087WWA1 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC10.81□□□□□ -0.68
LOC110117498A0A087WWA1 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
LOC110117498A0A087WWA1 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
LOC110117498A0A087WWA1 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LOC110117498A0A087WWA1 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
LOC110117498A0A087WWA1 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC10.81□□□□□ -0.68
LOC110117498A0A087WWA1 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LOC110117498A0A087WWA1 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LOC110117498A0A087WWA1 PAUPAR-201ENST00000630360 2965 ntBASIC10.81□□□□□ -0.68
LOC110117498A0A087WWA1 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
LOC110117498A0A087WWA1 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LOC110117498A0A087WWA1 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LOC110117498A0A087WWA1 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms