Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV27A0A087WT01 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV27A0A087WT01 STARP1-201ENST00000397973 869 ntBASIC16.07■□□□□ 0.16
TRAV27A0A087WT01 TSPY12P-201ENST00000421279 868 ntBASIC16.07■□□□□ 0.16
TRAV27A0A087WT01 AL137013.1-201ENST00000432946 1228 ntBASIC16.07■□□□□ 0.16
TRAV27A0A087WT01 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV27A0A087WT01 DDX43P3-201ENST00000441064 443 ntBASIC16.07■□□□□ 0.16
TRAV27A0A087WT01 YBX1P2-201ENST00000489612 999 ntBASIC16.07■□□□□ 0.16
TRAV27A0A087WT01 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV27A0A087WT01 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
TRAV27A0A087WT01 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
TRAV27A0A087WT01 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAV27A0A087WT01 AC005363.2-201ENST00000618631 242 ntBASIC16.07■□□□□ 0.16
TRAV27A0A087WT01 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV27A0A087WT01 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV27A0A087WT01 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.07■□□□□ 0.16
TRAV27A0A087WT01 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV27A0A087WT01 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.07■□□□□ 0.16
TRAV27A0A087WT01 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
TRAV27A0A087WT01 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV27A0A087WT01 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV27A0A087WT01 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAV27A0A087WT01 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.07■□□□□ 0.16
TRAV27A0A087WT01 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV27A0A087WT01 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
TRAV27A0A087WT01 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV27A0A087WT01 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV27A0A087WT01 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV27A0A087WT01 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV27A0A087WT01 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV27A0A087WT01 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV27A0A087WT01 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV27A0A087WT01 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV27A0A087WT01 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV27A0A087WT01 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
TRAV27A0A087WT01 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV27A0A087WT01 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
TRAV27A0A087WT01 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAV27A0A087WT01 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAV27A0A087WT01 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV27A0A087WT01 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV27A0A087WT01 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.06■□□□□ 0.16
TRAV27A0A087WT01 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAV27A0A087WT01 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV27A0A087WT01 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAV27A0A087WT01 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV27A0A087WT01 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV27A0A087WT01 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.06■□□□□ 0.16
TRAV27A0A087WT01 LINC01451-201ENST00000623792 534 ntBASIC16.06■□□□□ 0.16
TRAV27A0A087WT01 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV27A0A087WT01 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV27A0A087WT01 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV27A0A087WT01 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV27A0A087WT01 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV27A0A087WT01 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
TRAV27A0A087WT01 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV27A0A087WT01 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
TRAV27A0A087WT01 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV27A0A087WT01 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV27A0A087WT01 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV27A0A087WT01 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV27A0A087WT01 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV27A0A087WT01 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TRAV27A0A087WT01 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV27A0A087WT01 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAV27A0A087WT01 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV27A0A087WT01 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV27A0A087WT01 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV27A0A087WT01 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV27A0A087WT01 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV27A0A087WT01 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV27A0A087WT01 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV27A0A087WT01 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV27A0A087WT01 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV27A0A087WT01 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV27A0A087WT01 FAM8A6P-201ENST00000407496 1135 ntBASIC16.05■□□□□ 0.16
TRAV27A0A087WT01 AC117947.1-201ENST00000427448 529 ntBASIC16.05■□□□□ 0.16
TRAV27A0A087WT01 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAV27A0A087WT01 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.05■□□□□ 0.16
TRAV27A0A087WT01 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAV27A0A087WT01 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAV27A0A087WT01 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.05■□□□□ 0.16
TRAV27A0A087WT01 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.05■□□□□ 0.16
TRAV27A0A087WT01 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV27A0A087WT01 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV27A0A087WT01 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAV27A0A087WT01 AC009154.2-201ENST00000621177 724 ntBASIC16.05■□□□□ 0.16
TRAV27A0A087WT01 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
TRAV27A0A087WT01 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.05■□□□□ 0.16
TRAV27A0A087WT01 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV27A0A087WT01 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV27A0A087WT01 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAV27A0A087WT01 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAV27A0A087WT01 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV27A0A087WT01 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TRAV27A0A087WT01 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV27A0A087WT01 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV27A0A087WT01 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV27A0A087WT01 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV27A0A087WT01 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms