Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV18A0A075B6X5 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV18A0A075B6X5 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV18A0A075B6X5 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV18A0A075B6X5 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV18A0A075B6X5 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV18A0A075B6X5 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.25■□□□□ 0.03
TRAV18A0A075B6X5 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
TRAV18A0A075B6X5 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV18A0A075B6X5 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV18A0A075B6X5 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TRAV18A0A075B6X5 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TRAV18A0A075B6X5 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV18A0A075B6X5 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV18A0A075B6X5 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV18A0A075B6X5 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV18A0A075B6X5 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.25■□□□□ 0.03
TRAV18A0A075B6X5 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV18A0A075B6X5 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV18A0A075B6X5 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TRAV18A0A075B6X5 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV18A0A075B6X5 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV18A0A075B6X5 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC15.25■□□□□ 0.03
TRAV18A0A075B6X5 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC15.25■□□□□ 0.03
TRAV18A0A075B6X5 CYGB-204ENST00000589342 815 ntTSL 3 BASIC15.25■□□□□ 0.03
TRAV18A0A075B6X5 AC116407.2-201ENST00000613639 860 ntBASIC15.25■□□□□ 0.03
TRAV18A0A075B6X5 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV18A0A075B6X5 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV18A0A075B6X5 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV18A0A075B6X5 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.25■□□□□ 0.03
TRAV18A0A075B6X5 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
TRAV18A0A075B6X5 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
TRAV18A0A075B6X5 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.25■□□□□ 0.03
TRAV18A0A075B6X5 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TRAV18A0A075B6X5 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV18A0A075B6X5 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV18A0A075B6X5 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TRAV18A0A075B6X5 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV18A0A075B6X5 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV18A0A075B6X5 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV18A0A075B6X5 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.25■□□□□ 0.03
TRAV18A0A075B6X5 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TRAV18A0A075B6X5 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
TRAV18A0A075B6X5 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV18A0A075B6X5 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV18A0A075B6X5 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV18A0A075B6X5 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TRAV18A0A075B6X5 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV18A0A075B6X5 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
TRAV18A0A075B6X5 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
TRAV18A0A075B6X5 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV18A0A075B6X5 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV18A0A075B6X5 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV18A0A075B6X5 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TRAV18A0A075B6X5 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAV18A0A075B6X5 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV18A0A075B6X5 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV18A0A075B6X5 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV18A0A075B6X5 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV18A0A075B6X5 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAV18A0A075B6X5 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV18A0A075B6X5 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.24■□□□□ 0.03
TRAV18A0A075B6X5 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV18A0A075B6X5 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV18A0A075B6X5 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV18A0A075B6X5 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
TRAV18A0A075B6X5 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAV18A0A075B6X5 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAV18A0A075B6X5 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.24■□□□□ 0.03
TRAV18A0A075B6X5 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.24■□□□□ 0.03
TRAV18A0A075B6X5 APTR-205ENST00000447009 902 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAV18A0A075B6X5 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC15.24■□□□□ 0.03
TRAV18A0A075B6X5 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
TRAV18A0A075B6X5 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV18A0A075B6X5 FDX2-206ENST00000492239 773 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAV18A0A075B6X5 AC097488.1-201ENST00000507834 756 ntBASIC15.24■□□□□ 0.03
TRAV18A0A075B6X5 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAV18A0A075B6X5 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV18A0A075B6X5 RARRES2P10-201ENST00000564312 460 ntBASIC15.24■□□□□ 0.03
TRAV18A0A075B6X5 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.24■□□□□ 0.03
TRAV18A0A075B6X5 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV18A0A075B6X5 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV18A0A075B6X5 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
TRAV18A0A075B6X5 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV18A0A075B6X5 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV18A0A075B6X5 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAV18A0A075B6X5 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TRAV18A0A075B6X5 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV18A0A075B6X5 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TRAV18A0A075B6X5 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV18A0A075B6X5 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV18A0A075B6X5 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TRAV18A0A075B6X5 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV18A0A075B6X5 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAV18A0A075B6X5 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
TRAV18A0A075B6X5 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAV18A0A075B6X5 REXO1L11P-201ENST00000620964 1927 ntBASIC15.23■□□□□ 0.03
TRAV18A0A075B6X5 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV18A0A075B6X5 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV18A0A075B6X5 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms