Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 AL096828.2-201ENST00000567259 1965 ntBASIC21.32■■□□□ 1
DDX49Q9Y6V7 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC21.32■■□□□ 1
DDX49Q9Y6V7 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC21.32■■□□□ 1
DDX49Q9Y6V7 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
DDX49Q9Y6V7 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
DDX49Q9Y6V7 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
DDX49Q9Y6V7 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
DDX49Q9Y6V7 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC21.32■■□□□ 1
DDX49Q9Y6V7 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
DDX49Q9Y6V7 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
DDX49Q9Y6V7 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC21.32■■□□□ 1
DDX49Q9Y6V7 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC21.32■■□□□ 1
DDX49Q9Y6V7 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC21.32■■□□□ 1
DDX49Q9Y6V7 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC21.32■■□□□ 1
DDX49Q9Y6V7 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC21.32■■□□□ 1
DDX49Q9Y6V7 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC21.32■■□□□ 1
DDX49Q9Y6V7 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
DDX49Q9Y6V7 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
DDX49Q9Y6V7 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC21.32■■□□□ 1
DDX49Q9Y6V7 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
DDX49Q9Y6V7 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
DDX49Q9Y6V7 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
DDX49Q9Y6V7 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
DDX49Q9Y6V7 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
DDX49Q9Y6V7 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
DDX49Q9Y6V7 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
DDX49Q9Y6V7 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
DDX49Q9Y6V7 MYLKP1-201ENST00000509077 1580 ntBASIC21.31■■□□□ 1
DDX49Q9Y6V7 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC21.31■■□□□ 1
DDX49Q9Y6V7 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC21.31■■□□□ 1
DDX49Q9Y6V7 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DDX49Q9Y6V7 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC21.31■■□□□ 1
DDX49Q9Y6V7 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC21.31■■□□□ 1
DDX49Q9Y6V7 NARF-204ENST00000390006 1766 ntTSL 2 BASIC21.31■■□□□ 1
DDX49Q9Y6V7 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
DDX49Q9Y6V7 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC21.31■■□□□ 1
DDX49Q9Y6V7 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC21.31■■□□□ 1
DDX49Q9Y6V7 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC21.31■■□□□ 1
DDX49Q9Y6V7 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DDX49Q9Y6V7 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC21.31■■□□□ 1
DDX49Q9Y6V7 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC21.31■■□□□ 1
DDX49Q9Y6V7 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
DDX49Q9Y6V7 HLA-DQB1-201ENST00000374943 1656 ntBASIC21.31■■□□□ 1
DDX49Q9Y6V7 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
DDX49Q9Y6V7 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
DDX49Q9Y6V7 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC21.3■■□□□ 1
DDX49Q9Y6V7 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
DDX49Q9Y6V7 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC21.3■■□□□ 1
DDX49Q9Y6V7 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
DDX49Q9Y6V7 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
DDX49Q9Y6V7 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC21.3■■□□□ 1
DDX49Q9Y6V7 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
DDX49Q9Y6V7 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC21.3■■□□□ 1
DDX49Q9Y6V7 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
DDX49Q9Y6V7 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC21.3■■□□□ 1
DDX49Q9Y6V7 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC21.3■■□□□ 1
DDX49Q9Y6V7 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
DDX49Q9Y6V7 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC21.3■■□□□ 1
DDX49Q9Y6V7 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
DDX49Q9Y6V7 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC21.3■■□□□ 1
DDX49Q9Y6V7 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC21.3■■□□□ 1
DDX49Q9Y6V7 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.3■■□□□ 1
DDX49Q9Y6V7 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC21.3■■□□□ 1
DDX49Q9Y6V7 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
DDX49Q9Y6V7 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
DDX49Q9Y6V7 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
DDX49Q9Y6V7 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
DDX49Q9Y6V7 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DDX49Q9Y6V7 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC21.29■■□□□ 1
DDX49Q9Y6V7 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC21.29■■□□□ 1
DDX49Q9Y6V7 NME9-203ENST00000383180 2133 ntTSL 2 BASIC21.29■■□□□ 1
DDX49Q9Y6V7 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
DDX49Q9Y6V7 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC21.29■■□□□ 1
DDX49Q9Y6V7 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC21.29■■□□□ 1
DDX49Q9Y6V7 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DDX49Q9Y6V7 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC21.29■■□□□ 1
DDX49Q9Y6V7 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
DDX49Q9Y6V7 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC21.29■■□□□ 1
DDX49Q9Y6V7 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DDX49Q9Y6V7 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DDX49Q9Y6V7 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
DDX49Q9Y6V7 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC21.29■■□□□ 1
DDX49Q9Y6V7 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC21.29■■□□□ 1
DDX49Q9Y6V7 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC21.29■■□□□ 1
DDX49Q9Y6V7 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC21.29■■□□□ 1
DDX49Q9Y6V7 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.29■■□□□ 1
DDX49Q9Y6V7 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC21.29■■□□□ 1
DDX49Q9Y6V7 AL450487.1-201ENST00000426799 995 ntBASIC21.29■■□□□ 1
DDX49Q9Y6V7 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC21.29■■□□□ 1
DDX49Q9Y6V7 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC21.29■■□□□ 1
DDX49Q9Y6V7 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC21.29■■□□□ 1
DDX49Q9Y6V7 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
DDX49Q9Y6V7 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
DDX49Q9Y6V7 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DDX49Q9Y6V7 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
DDX49Q9Y6V7 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DDX49Q9Y6V7 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DDX49Q9Y6V7 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC21.29■■□□□ 1
DDX49Q9Y6V7 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC21.29■■□□□ 1
DDX49Q9Y6V7 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms