Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
PCDHGA11Q9Y5H2 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA11Q9Y5H2 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA11Q9Y5H2 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
PCDHGA11Q9Y5H2 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHGA11Q9Y5H2 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA11Q9Y5H2 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA11Q9Y5H2 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA11Q9Y5H2 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA11Q9Y5H2 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHGA11Q9Y5H2 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA11Q9Y5H2 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.22■□□□□ 0.35
PCDHGA11Q9Y5H2 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA11Q9Y5H2 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA11Q9Y5H2 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA11Q9Y5H2 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA11Q9Y5H2 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA11Q9Y5H2 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA11Q9Y5H2 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHGA11Q9Y5H2 DUX4L26-201ENST00000489078 1255 ntBASIC17.22■□□□□ 0.35
PCDHGA11Q9Y5H2 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHGA11Q9Y5H2 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.22■□□□□ 0.35
PCDHGA11Q9Y5H2 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.22■□□□□ 0.35
PCDHGA11Q9Y5H2 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.22■□□□□ 0.35
PCDHGA11Q9Y5H2 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
PCDHGA11Q9Y5H2 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA11Q9Y5H2 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA11Q9Y5H2 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
PCDHGA11Q9Y5H2 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA11Q9Y5H2 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHGA11Q9Y5H2 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA11Q9Y5H2 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDHGA11Q9Y5H2 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA11Q9Y5H2 PP12613-201ENST00000424958 2230 ntBASIC17.21■□□□□ 0.35
PCDHGA11Q9Y5H2 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA11Q9Y5H2 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHGA11Q9Y5H2 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA11Q9Y5H2 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.21■□□□□ 0.35
PCDHGA11Q9Y5H2 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA11Q9Y5H2 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHGA11Q9Y5H2 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA11Q9Y5H2 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA11Q9Y5H2 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA11Q9Y5H2 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PCDHGA11Q9Y5H2 TMPOP1-202ENST00000424642 1267 ntBASIC17.21■□□□□ 0.35
PCDHGA11Q9Y5H2 DDX43P3-201ENST00000441064 443 ntBASIC17.21■□□□□ 0.35
PCDHGA11Q9Y5H2 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHGA11Q9Y5H2 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.21■□□□□ 0.35
PCDHGA11Q9Y5H2 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA11Q9Y5H2 VENTXP5-201ENST00000523979 775 ntBASIC17.21■□□□□ 0.35
PCDHGA11Q9Y5H2 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.21■□□□□ 0.35
PCDHGA11Q9Y5H2 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.21■□□□□ 0.35
PCDHGA11Q9Y5H2 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.21■□□□□ 0.35
PCDHGA11Q9Y5H2 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
PCDHGA11Q9Y5H2 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.21■□□□□ 0.35
PCDHGA11Q9Y5H2 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.21■□□□□ 0.35
PCDHGA11Q9Y5H2 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
PCDHGA11Q9Y5H2 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA11Q9Y5H2 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PCDHGA11Q9Y5H2 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA11Q9Y5H2 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA11Q9Y5H2 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA11Q9Y5H2 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
PCDHGA11Q9Y5H2 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDHGA11Q9Y5H2 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA11Q9Y5H2 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA11Q9Y5H2 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
PCDHGA11Q9Y5H2 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA11Q9Y5H2 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA11Q9Y5H2 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA11Q9Y5H2 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA11Q9Y5H2 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDHGA11Q9Y5H2 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
PCDHGA11Q9Y5H2 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDHGA11Q9Y5H2 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA11Q9Y5H2 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
PCDHGA11Q9Y5H2 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PCDHGA11Q9Y5H2 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA11Q9Y5H2 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
PCDHGA11Q9Y5H2 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA11Q9Y5H2 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA11Q9Y5H2 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA11Q9Y5H2 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHGA11Q9Y5H2 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHGA11Q9Y5H2 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHGA11Q9Y5H2 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.2■□□□□ 0.34
PCDHGA11Q9Y5H2 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.2■□□□□ 0.34
PCDHGA11Q9Y5H2 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.2■□□□□ 0.34
PCDHGA11Q9Y5H2 AC005332.3-201ENST00000589904 676 ntBASIC17.2■□□□□ 0.34
PCDHGA11Q9Y5H2 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHGA11Q9Y5H2 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PCDHGA11Q9Y5H2 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA11Q9Y5H2 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA11Q9Y5H2 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA11Q9Y5H2 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
PCDHGA11Q9Y5H2 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA11Q9Y5H2 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA11Q9Y5H2 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHGA11Q9Y5H2 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDHGA11Q9Y5H2 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms