Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00588Q9Y4M8 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC12.13□□□□□ -0.47
LINC00588Q9Y4M8 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC00588Q9Y4M8 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00588Q9Y4M8 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
LINC00588Q9Y4M8 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00588Q9Y4M8 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC00588Q9Y4M8 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC12.13□□□□□ -0.47
LINC00588Q9Y4M8 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
LINC00588Q9Y4M8 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00588Q9Y4M8 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
LINC00588Q9Y4M8 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC12.13□□□□□ -0.47
LINC00588Q9Y4M8 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
LINC00588Q9Y4M8 RPS2P28-201ENST00000314255 741 ntBASIC12.13□□□□□ -0.47
LINC00588Q9Y4M8 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00588Q9Y4M8 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00588Q9Y4M8 TLE1-202ENST00000376484 666 ntTSL 3 BASIC12.13□□□□□ -0.47
LINC00588Q9Y4M8 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00588Q9Y4M8 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
LINC00588Q9Y4M8 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC12.13□□□□□ -0.47
LINC00588Q9Y4M8 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
LINC00588Q9Y4M8 HNRNPDP1-201ENST00000439535 754 ntBASIC12.13□□□□□ -0.47
LINC00588Q9Y4M8 NKTR-203ENST00000442970 646 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC00588Q9Y4M8 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
LINC00588Q9Y4M8 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00588Q9Y4M8 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC12.13□□□□□ -0.47
LINC00588Q9Y4M8 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC12.13□□□□□ -0.47
LINC00588Q9Y4M8 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
LINC00588Q9Y4M8 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC00588Q9Y4M8 PAM16-208ENST00000573553 722 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC00588Q9Y4M8 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC12.13□□□□□ -0.47
LINC00588Q9Y4M8 TMED1-207ENST00000591695 809 ntTSL 5 BASIC12.13□□□□□ -0.47
LINC00588Q9Y4M8 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00588Q9Y4M8 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC12.13□□□□□ -0.47
LINC00588Q9Y4M8 BX640515.1-201ENST00000617215 977 ntBASIC12.13□□□□□ -0.47
LINC00588Q9Y4M8 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
LINC00588Q9Y4M8 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00588Q9Y4M8 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC00588Q9Y4M8 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC12.13□□□□□ -0.47
LINC00588Q9Y4M8 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
LINC00588Q9Y4M8 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00588Q9Y4M8 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00588Q9Y4M8 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00588Q9Y4M8 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00588Q9Y4M8 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 BX276092.7-203ENST00000637198 1536 ntBASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 RAB17-203ENST00000409576 466 ntTSL 3 BASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 RPS2P1-201ENST00000434010 821 ntBASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 DDX43P3-201ENST00000441064 443 ntBASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 BX005266.1-201ENST00000473402 457 ntBASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 PNMT-203ENST00000581428 677 ntTSL 2 BASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 AL049840.3-201ENST00000602669 611 ntBASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 PRKN-208ENST00000610470 531 ntTSL 2 BASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 PRKN-209ENST00000612485 225 ntTSL 5 BASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 AC073592.5-201ENST00000624854 528 ntBASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 FAM215A-202ENST00000632077 792 ntBASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00588Q9Y4M8 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms