Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 AC005498.2-205ENST00000593218 784 ntBASIC22.2■■□□□ 1.14
RTCBQ9Y3I0 AC116407.2-201ENST00000613639 860 ntBASIC22.2■■□□□ 1.14
RTCBQ9Y3I0 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RTCBQ9Y3I0 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC22.2■■□□□ 1.14
RTCBQ9Y3I0 AL031598.1-201ENST00000561511 1773 ntBASIC22.2■■□□□ 1.14
RTCBQ9Y3I0 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
RTCBQ9Y3I0 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RTCBQ9Y3I0 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RTCBQ9Y3I0 HLA-DRB6-201ENST00000411500 1235 ntBASIC22.19■■□□□ 1.14
RTCBQ9Y3I0 DDX43P3-201ENST00000441064 443 ntBASIC22.19■■□□□ 1.14
RTCBQ9Y3I0 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC22.19■■□□□ 1.14
RTCBQ9Y3I0 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC22.19■■□□□ 1.14
RTCBQ9Y3I0 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RTCBQ9Y3I0 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC22.19■■□□□ 1.14
RTCBQ9Y3I0 LINC00628-201ENST00000628516 1289 ntBASIC22.19■■□□□ 1.14
RTCBQ9Y3I0 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RTCBQ9Y3I0 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RTCBQ9Y3I0 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RTCBQ9Y3I0 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC22.19■■□□□ 1.14
RTCBQ9Y3I0 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RTCBQ9Y3I0 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC22.19■■□□□ 1.14
RTCBQ9Y3I0 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
RTCBQ9Y3I0 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RTCBQ9Y3I0 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
RTCBQ9Y3I0 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
RTCBQ9Y3I0 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC22.19■■□□□ 1.14
RTCBQ9Y3I0 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
RTCBQ9Y3I0 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC22.18■■□□□ 1.14
RTCBQ9Y3I0 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
RTCBQ9Y3I0 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC22.18■■□□□ 1.14
RTCBQ9Y3I0 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
RTCBQ9Y3I0 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC22.18■■□□□ 1.14
RTCBQ9Y3I0 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC22.18■■□□□ 1.14
RTCBQ9Y3I0 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC22.18■■□□□ 1.14
RTCBQ9Y3I0 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC22.18■■□□□ 1.14
RTCBQ9Y3I0 CYB561-216ENST00000582297 897 ntTSL 3 BASIC22.18■■□□□ 1.14
RTCBQ9Y3I0 AC138761.1-201ENST00000584393 385 ntBASIC22.18■■□□□ 1.14
RTCBQ9Y3I0 INO80C-206ENST00000586489 594 ntTSL 3 BASIC22.18■■□□□ 1.14
RTCBQ9Y3I0 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC22.18■■□□□ 1.14
RTCBQ9Y3I0 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RTCBQ9Y3I0 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC22.18■■□□□ 1.14
RTCBQ9Y3I0 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RTCBQ9Y3I0 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
RTCBQ9Y3I0 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RTCBQ9Y3I0 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RTCBQ9Y3I0 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
RTCBQ9Y3I0 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
RTCBQ9Y3I0 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RTCBQ9Y3I0 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
RTCBQ9Y3I0 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
RTCBQ9Y3I0 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
RTCBQ9Y3I0 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC22.17■■□□□ 1.14
RTCBQ9Y3I0 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC22.17■■□□□ 1.14
RTCBQ9Y3I0 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC22.17■■□□□ 1.14
RTCBQ9Y3I0 WBP2-203ENST00000433525 928 ntTSL 2 BASIC22.17■■□□□ 1.14
RTCBQ9Y3I0 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC22.17■■□□□ 1.14
RTCBQ9Y3I0 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
RTCBQ9Y3I0 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
RTCBQ9Y3I0 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
RTCBQ9Y3I0 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC22.17■■□□□ 1.14
RTCBQ9Y3I0 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC22.17■■□□□ 1.14
RTCBQ9Y3I0 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC22.17■■□□□ 1.14
RTCBQ9Y3I0 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC22.17■■□□□ 1.14
RTCBQ9Y3I0 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC22.17■■□□□ 1.14
RTCBQ9Y3I0 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC22.17■■□□□ 1.14
RTCBQ9Y3I0 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RTCBQ9Y3I0 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC22.17■■□□□ 1.14
RTCBQ9Y3I0 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC22.17■■□□□ 1.14
RTCBQ9Y3I0 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RTCBQ9Y3I0 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
RTCBQ9Y3I0 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
RTCBQ9Y3I0 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
RTCBQ9Y3I0 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RTCBQ9Y3I0 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
RTCBQ9Y3I0 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
RTCBQ9Y3I0 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RTCBQ9Y3I0 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
RTCBQ9Y3I0 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
RTCBQ9Y3I0 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC22.16■■□□□ 1.14
RTCBQ9Y3I0 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RTCBQ9Y3I0 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RTCBQ9Y3I0 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
RTCBQ9Y3I0 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RTCBQ9Y3I0 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC22.16■■□□□ 1.14
RTCBQ9Y3I0 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RTCBQ9Y3I0 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RTCBQ9Y3I0 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RTCBQ9Y3I0 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC22.16■■□□□ 1.14
RTCBQ9Y3I0 FAM86GP-201ENST00000448322 971 ntBASIC22.16■■□□□ 1.14
RTCBQ9Y3I0 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC22.16■■□□□ 1.14
RTCBQ9Y3I0 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC22.16■■□□□ 1.14
RTCBQ9Y3I0 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC22.16■■□□□ 1.14
RTCBQ9Y3I0 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC22.16■■□□□ 1.14
RTCBQ9Y3I0 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RTCBQ9Y3I0 MIR4745-201ENST00000577608 62 ntBASIC22.16■■□□□ 1.14
RTCBQ9Y3I0 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC22.16■■□□□ 1.14
RTCBQ9Y3I0 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RTCBQ9Y3I0 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
RTCBQ9Y3I0 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RTCBQ9Y3I0 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms