Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP25Q9UHP3 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP25Q9UHP3 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
USP25Q9UHP3 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
USP25Q9UHP3 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
USP25Q9UHP3 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
USP25Q9UHP3 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
USP25Q9UHP3 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
USP25Q9UHP3 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC20.33■□□□□ 0.85
USP25Q9UHP3 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
USP25Q9UHP3 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
USP25Q9UHP3 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
USP25Q9UHP3 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
USP25Q9UHP3 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.33■□□□□ 0.85
USP25Q9UHP3 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.33■□□□□ 0.85
USP25Q9UHP3 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
USP25Q9UHP3 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
USP25Q9UHP3 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
USP25Q9UHP3 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
USP25Q9UHP3 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
USP25Q9UHP3 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
USP25Q9UHP3 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
USP25Q9UHP3 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
USP25Q9UHP3 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
USP25Q9UHP3 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
USP25Q9UHP3 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC20.33■□□□□ 0.84
USP25Q9UHP3 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
USP25Q9UHP3 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
USP25Q9UHP3 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
USP25Q9UHP3 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
USP25Q9UHP3 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC20.32■□□□□ 0.84
USP25Q9UHP3 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP25Q9UHP3 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
USP25Q9UHP3 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
USP25Q9UHP3 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP25Q9UHP3 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
USP25Q9UHP3 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
USP25Q9UHP3 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC20.32■□□□□ 0.84
USP25Q9UHP3 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.32■□□□□ 0.84
USP25Q9UHP3 AC113404.2-201ENST00000507884 177 ntBASIC20.32■□□□□ 0.84
USP25Q9UHP3 AC141257.4-201ENST00000634557 245 ntBASIC20.32■□□□□ 0.84
USP25Q9UHP3 AC136944.6-201ENST00000634818 245 ntBASIC20.32■□□□□ 0.84
USP25Q9UHP3 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
USP25Q9UHP3 PCDHB19P-201ENST00000570871 2371 ntBASIC20.32■□□□□ 0.84
USP25Q9UHP3 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP25Q9UHP3 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP25Q9UHP3 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP25Q9UHP3 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC20.32■□□□□ 0.84
USP25Q9UHP3 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP25Q9UHP3 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
USP25Q9UHP3 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP25Q9UHP3 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
USP25Q9UHP3 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP25Q9UHP3 CICP6-201ENST00000457191 2729 ntBASIC20.32■□□□□ 0.84
USP25Q9UHP3 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC20.31■□□□□ 0.84
USP25Q9UHP3 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP25Q9UHP3 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.31■□□□□ 0.84
USP25Q9UHP3 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
USP25Q9UHP3 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP25Q9UHP3 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP25Q9UHP3 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC20.31■□□□□ 0.84
USP25Q9UHP3 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC20.31■□□□□ 0.84
USP25Q9UHP3 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
USP25Q9UHP3 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP25Q9UHP3 LINC00167-201ENST00000530583 1419 ntBASIC20.31■□□□□ 0.84
USP25Q9UHP3 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP25Q9UHP3 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP25Q9UHP3 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
USP25Q9UHP3 AL596275.1-201ENST00000423464 877 ntBASIC20.31■□□□□ 0.84
USP25Q9UHP3 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP25Q9UHP3 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
USP25Q9UHP3 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.31■□□□□ 0.84
USP25Q9UHP3 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.31■□□□□ 0.84
USP25Q9UHP3 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP25Q9UHP3 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.31■□□□□ 0.84
USP25Q9UHP3 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.31■□□□□ 0.84
USP25Q9UHP3 AL138966.2-201ENST00000621997 464 ntBASIC20.31■□□□□ 0.84
USP25Q9UHP3 AL157888.1-201ENST00000631930 593 ntBASIC20.31■□□□□ 0.84
USP25Q9UHP3 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
USP25Q9UHP3 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP25Q9UHP3 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
USP25Q9UHP3 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.31■□□□□ 0.84
USP25Q9UHP3 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP25Q9UHP3 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.31■□□□□ 0.84
USP25Q9UHP3 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC20.31■□□□□ 0.84
USP25Q9UHP3 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP25Q9UHP3 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.31■□□□□ 0.84
USP25Q9UHP3 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP25Q9UHP3 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
USP25Q9UHP3 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
USP25Q9UHP3 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP25Q9UHP3 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP25Q9UHP3 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
USP25Q9UHP3 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
USP25Q9UHP3 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.3■□□□□ 0.84
USP25Q9UHP3 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC20.3■□□□□ 0.84
USP25Q9UHP3 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
USP25Q9UHP3 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.3■□□□□ 0.84
USP25Q9UHP3 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC20.3■□□□□ 0.84
USP25Q9UHP3 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms