Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
NCKIPSDQ9NZQ3 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NCKIPSDQ9NZQ3 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
NCKIPSDQ9NZQ3 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NCKIPSDQ9NZQ3 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NCKIPSDQ9NZQ3 KRT8P10-201ENST00000450021 1447 ntBASIC17.96■□□□□ 0.47
NCKIPSDQ9NZQ3 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NCKIPSDQ9NZQ3 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.96■□□□□ 0.47
NCKIPSDQ9NZQ3 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.96■□□□□ 0.46
NCKIPSDQ9NZQ3 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
NCKIPSDQ9NZQ3 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NCKIPSDQ9NZQ3 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NCKIPSDQ9NZQ3 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NCKIPSDQ9NZQ3 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.95■□□□□ 0.46
NCKIPSDQ9NZQ3 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NCKIPSDQ9NZQ3 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
NCKIPSDQ9NZQ3 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NCKIPSDQ9NZQ3 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
NCKIPSDQ9NZQ3 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
NCKIPSDQ9NZQ3 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.95■□□□□ 0.46
NCKIPSDQ9NZQ3 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.95■□□□□ 0.46
NCKIPSDQ9NZQ3 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
NCKIPSDQ9NZQ3 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NCKIPSDQ9NZQ3 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NCKIPSDQ9NZQ3 IGHGP-201ENST00000390555 1178 ntBASIC17.95■□□□□ 0.46
NCKIPSDQ9NZQ3 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NCKIPSDQ9NZQ3 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
NCKIPSDQ9NZQ3 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NCKIPSDQ9NZQ3 AC008687.5-201ENST00000593746 558 ntBASIC17.95■□□□□ 0.46
NCKIPSDQ9NZQ3 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.95■□□□□ 0.46
NCKIPSDQ9NZQ3 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NCKIPSDQ9NZQ3 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NCKIPSDQ9NZQ3 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NCKIPSDQ9NZQ3 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NCKIPSDQ9NZQ3 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
NCKIPSDQ9NZQ3 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
NCKIPSDQ9NZQ3 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NCKIPSDQ9NZQ3 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.94■□□□□ 0.46
NCKIPSDQ9NZQ3 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NCKIPSDQ9NZQ3 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.94■□□□□ 0.46
NCKIPSDQ9NZQ3 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
NCKIPSDQ9NZQ3 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NCKIPSDQ9NZQ3 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
NCKIPSDQ9NZQ3 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.94■□□□□ 0.46
NCKIPSDQ9NZQ3 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.94■□□□□ 0.46
NCKIPSDQ9NZQ3 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NCKIPSDQ9NZQ3 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NCKIPSDQ9NZQ3 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NCKIPSDQ9NZQ3 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.94■□□□□ 0.46
NCKIPSDQ9NZQ3 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NCKIPSDQ9NZQ3 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
NCKIPSDQ9NZQ3 AC246785.2-201ENST00000432512 513 ntBASIC17.94■□□□□ 0.46
NCKIPSDQ9NZQ3 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.94■□□□□ 0.46
NCKIPSDQ9NZQ3 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.94■□□□□ 0.46
NCKIPSDQ9NZQ3 KRT18P31-201ENST00000506277 1292 ntBASIC17.94■□□□□ 0.46
NCKIPSDQ9NZQ3 UNC93B7-201ENST00000509439 705 ntBASIC17.94■□□□□ 0.46
NCKIPSDQ9NZQ3 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
NCKIPSDQ9NZQ3 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.94■□□□□ 0.46
NCKIPSDQ9NZQ3 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.94■□□□□ 0.46
NCKIPSDQ9NZQ3 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.94■□□□□ 0.46
NCKIPSDQ9NZQ3 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.94■□□□□ 0.46
NCKIPSDQ9NZQ3 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NCKIPSDQ9NZQ3 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NCKIPSDQ9NZQ3 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NCKIPSDQ9NZQ3 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NCKIPSDQ9NZQ3 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NCKIPSDQ9NZQ3 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NCKIPSDQ9NZQ3 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NCKIPSDQ9NZQ3 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.93■□□□□ 0.46
NCKIPSDQ9NZQ3 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NCKIPSDQ9NZQ3 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
NCKIPSDQ9NZQ3 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NCKIPSDQ9NZQ3 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NCKIPSDQ9NZQ3 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NCKIPSDQ9NZQ3 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NCKIPSDQ9NZQ3 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
NCKIPSDQ9NZQ3 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.93■□□□□ 0.46
NCKIPSDQ9NZQ3 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.93■□□□□ 0.46
NCKIPSDQ9NZQ3 FOSL1P1-201ENST00000511041 816 ntBASIC17.93■□□□□ 0.46
NCKIPSDQ9NZQ3 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.93■□□□□ 0.46
NCKIPSDQ9NZQ3 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.93■□□□□ 0.46
NCKIPSDQ9NZQ3 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NCKIPSDQ9NZQ3 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NCKIPSDQ9NZQ3 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.93■□□□□ 0.46
NCKIPSDQ9NZQ3 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NCKIPSDQ9NZQ3 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NCKIPSDQ9NZQ3 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NCKIPSDQ9NZQ3 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
NCKIPSDQ9NZQ3 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NCKIPSDQ9NZQ3 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NCKIPSDQ9NZQ3 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.93■□□□□ 0.46
NCKIPSDQ9NZQ3 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
NCKIPSDQ9NZQ3 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
NCKIPSDQ9NZQ3 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.92■□□□□ 0.46
NCKIPSDQ9NZQ3 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.92■□□□□ 0.46
NCKIPSDQ9NZQ3 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NCKIPSDQ9NZQ3 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
NCKIPSDQ9NZQ3 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NCKIPSDQ9NZQ3 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
NCKIPSDQ9NZQ3 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms