Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NDE1Q9NXR1 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
NDE1Q9NXR1 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NDE1Q9NXR1 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
NDE1Q9NXR1 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NDE1Q9NXR1 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NDE1Q9NXR1 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NDE1Q9NXR1 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NDE1Q9NXR1 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NDE1Q9NXR1 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NDE1Q9NXR1 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
NDE1Q9NXR1 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NDE1Q9NXR1 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NDE1Q9NXR1 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.2■□□□□ 0.34
NDE1Q9NXR1 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NDE1Q9NXR1 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.2■□□□□ 0.34
NDE1Q9NXR1 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
NDE1Q9NXR1 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
NDE1Q9NXR1 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.2■□□□□ 0.34
NDE1Q9NXR1 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NDE1Q9NXR1 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.2■□□□□ 0.34
NDE1Q9NXR1 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.2■□□□□ 0.34
NDE1Q9NXR1 AL137784.2-201ENST00000607332 1000 ntBASIC17.2■□□□□ 0.34
NDE1Q9NXR1 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.2■□□□□ 0.34
NDE1Q9NXR1 AC116407.2-201ENST00000613639 860 ntBASIC17.2■□□□□ 0.34
NDE1Q9NXR1 AC130371.2-201ENST00000619443 611 ntBASIC17.2■□□□□ 0.34
NDE1Q9NXR1 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.2■□□□□ 0.34
NDE1Q9NXR1 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
NDE1Q9NXR1 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
NDE1Q9NXR1 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NDE1Q9NXR1 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
NDE1Q9NXR1 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.2■□□□□ 0.34
NDE1Q9NXR1 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NDE1Q9NXR1 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
NDE1Q9NXR1 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NDE1Q9NXR1 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NDE1Q9NXR1 AC099343.3-201ENST00000605834 2503 ntBASIC17.19■□□□□ 0.34
NDE1Q9NXR1 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NDE1Q9NXR1 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
NDE1Q9NXR1 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.19■□□□□ 0.34
NDE1Q9NXR1 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.19■□□□□ 0.34
NDE1Q9NXR1 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NDE1Q9NXR1 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NDE1Q9NXR1 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.19■□□□□ 0.34
NDE1Q9NXR1 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.19■□□□□ 0.34
NDE1Q9NXR1 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.19■□□□□ 0.34
NDE1Q9NXR1 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
NDE1Q9NXR1 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NDE1Q9NXR1 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
NDE1Q9NXR1 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NDE1Q9NXR1 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.19■□□□□ 0.34
NDE1Q9NXR1 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.19■□□□□ 0.34
NDE1Q9NXR1 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.19■□□□□ 0.34
NDE1Q9NXR1 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.19■□□□□ 0.34
NDE1Q9NXR1 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
NDE1Q9NXR1 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
NDE1Q9NXR1 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
NDE1Q9NXR1 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
NDE1Q9NXR1 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
NDE1Q9NXR1 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
NDE1Q9NXR1 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NDE1Q9NXR1 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDE1Q9NXR1 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NDE1Q9NXR1 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDE1Q9NXR1 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NDE1Q9NXR1 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
NDE1Q9NXR1 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
NDE1Q9NXR1 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NDE1Q9NXR1 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDE1Q9NXR1 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NDE1Q9NXR1 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.18■□□□□ 0.34
NDE1Q9NXR1 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDE1Q9NXR1 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.18■□□□□ 0.34
NDE1Q9NXR1 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDE1Q9NXR1 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDE1Q9NXR1 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
NDE1Q9NXR1 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
NDE1Q9NXR1 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
NDE1Q9NXR1 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.18■□□□□ 0.34
NDE1Q9NXR1 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NDE1Q9NXR1 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
NDE1Q9NXR1 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.18■□□□□ 0.34
NDE1Q9NXR1 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NDE1Q9NXR1 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.18■□□□□ 0.34
NDE1Q9NXR1 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
NDE1Q9NXR1 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.18■□□□□ 0.34
NDE1Q9NXR1 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDE1Q9NXR1 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDE1Q9NXR1 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NDE1Q9NXR1 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
NDE1Q9NXR1 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDE1Q9NXR1 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDE1Q9NXR1 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDE1Q9NXR1 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.18■□□□□ 0.34
NDE1Q9NXR1 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.18■□□□□ 0.34
NDE1Q9NXR1 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NDE1Q9NXR1 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDE1Q9NXR1 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDE1Q9NXR1 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NDE1Q9NXR1 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms