Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.68■□□□□ 0.74
BLOC1S4Q9NUP1 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.68■□□□□ 0.74
BLOC1S4Q9NUP1 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BLOC1S4Q9NUP1 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BLOC1S4Q9NUP1 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BLOC1S4Q9NUP1 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BLOC1S4Q9NUP1 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BLOC1S4Q9NUP1 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
BLOC1S4Q9NUP1 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
BLOC1S4Q9NUP1 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
BLOC1S4Q9NUP1 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
BLOC1S4Q9NUP1 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.68■□□□□ 0.74
BLOC1S4Q9NUP1 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
BLOC1S4Q9NUP1 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
BLOC1S4Q9NUP1 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.68■□□□□ 0.74
BLOC1S4Q9NUP1 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.68■□□□□ 0.74
BLOC1S4Q9NUP1 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
BLOC1S4Q9NUP1 AC012615.1-201ENST00000565797 1299 ntBASIC19.68■□□□□ 0.74
BLOC1S4Q9NUP1 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BLOC1S4Q9NUP1 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
BLOC1S4Q9NUP1 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
BLOC1S4Q9NUP1 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
BLOC1S4Q9NUP1 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
BLOC1S4Q9NUP1 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BLOC1S4Q9NUP1 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BLOC1S4Q9NUP1 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.67■□□□□ 0.74
BLOC1S4Q9NUP1 AC108860.2-201ENST00000562760 2183 ntBASIC19.67■□□□□ 0.74
BLOC1S4Q9NUP1 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BLOC1S4Q9NUP1 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BLOC1S4Q9NUP1 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
BLOC1S4Q9NUP1 INTS4P1-201ENST00000438455 1935 ntBASIC19.67■□□□□ 0.74
BLOC1S4Q9NUP1 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BLOC1S4Q9NUP1 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.67■□□□□ 0.74
BLOC1S4Q9NUP1 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BLOC1S4Q9NUP1 RCN1P2-201ENST00000398357 915 ntBASIC19.67■□□□□ 0.74
BLOC1S4Q9NUP1 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.67■□□□□ 0.74
BLOC1S4Q9NUP1 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.67■□□□□ 0.74
BLOC1S4Q9NUP1 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.67■□□□□ 0.74
BLOC1S4Q9NUP1 AC109462.3-201ENST00000573934 613 ntBASIC19.67■□□□□ 0.74
BLOC1S4Q9NUP1 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BLOC1S4Q9NUP1 CROCCP2-202ENST00000412962 2773 ntBASIC19.67■□□□□ 0.74
BLOC1S4Q9NUP1 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BLOC1S4Q9NUP1 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
BLOC1S4Q9NUP1 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
BLOC1S4Q9NUP1 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BLOC1S4Q9NUP1 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
BLOC1S4Q9NUP1 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BLOC1S4Q9NUP1 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
BLOC1S4Q9NUP1 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BLOC1S4Q9NUP1 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.67■□□□□ 0.74
BLOC1S4Q9NUP1 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BLOC1S4Q9NUP1 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.67■□□□□ 0.74
BLOC1S4Q9NUP1 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BLOC1S4Q9NUP1 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.66■□□□□ 0.74
BLOC1S4Q9NUP1 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
BLOC1S4Q9NUP1 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
BLOC1S4Q9NUP1 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BLOC1S4Q9NUP1 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
BLOC1S4Q9NUP1 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.66■□□□□ 0.74
BLOC1S4Q9NUP1 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.66■□□□□ 0.74
BLOC1S4Q9NUP1 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BLOC1S4Q9NUP1 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BLOC1S4Q9NUP1 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BLOC1S4Q9NUP1 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BLOC1S4Q9NUP1 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
BLOC1S4Q9NUP1 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
BLOC1S4Q9NUP1 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
BLOC1S4Q9NUP1 MINOS1P3-201ENST00000457048 203 ntBASIC19.66■□□□□ 0.74
BLOC1S4Q9NUP1 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.66■□□□□ 0.74
BLOC1S4Q9NUP1 AC104819.1-201ENST00000504587 486 ntBASIC19.66■□□□□ 0.74
BLOC1S4Q9NUP1 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.66■□□□□ 0.74
BLOC1S4Q9NUP1 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.66■□□□□ 0.74
BLOC1S4Q9NUP1 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BLOC1S4Q9NUP1 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.66■□□□□ 0.74
BLOC1S4Q9NUP1 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
BLOC1S4Q9NUP1 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.66■□□□□ 0.74
BLOC1S4Q9NUP1 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.66■□□□□ 0.74
BLOC1S4Q9NUP1 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BLOC1S4Q9NUP1 KRT8P10-201ENST00000450021 1447 ntBASIC19.66■□□□□ 0.74
BLOC1S4Q9NUP1 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
BLOC1S4Q9NUP1 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
BLOC1S4Q9NUP1 FZD10-202ENST00000539839 3282 ntBASIC19.66■□□□□ 0.74
BLOC1S4Q9NUP1 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
BLOC1S4Q9NUP1 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
BLOC1S4Q9NUP1 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.65■□□□□ 0.74
BLOC1S4Q9NUP1 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
BLOC1S4Q9NUP1 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BLOC1S4Q9NUP1 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
BLOC1S4Q9NUP1 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
BLOC1S4Q9NUP1 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BLOC1S4Q9NUP1 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.65■□□□□ 0.74
BLOC1S4Q9NUP1 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
BLOC1S4Q9NUP1 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BLOC1S4Q9NUP1 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
BLOC1S4Q9NUP1 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BLOC1S4Q9NUP1 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BLOC1S4Q9NUP1 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.65■□□□□ 0.74
BLOC1S4Q9NUP1 AC096582.2-201ENST00000510860 516 ntBASIC19.65■□□□□ 0.74
BLOC1S4Q9NUP1 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BLOC1S4Q9NUP1 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms