Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.271e-6■□□□□ 11
DROSHAQ9NRR4 SUN1-211ENST00000427969 520 ntTSL 422.89■■□□□ 1.252e-18■□□□□ 11
DROSHAQ9NRR4 IMPDH2-212ENST00000496837 760 ntTSL 222.84■■□□□ 1.252e-10■□□□□ 11
DROSHAQ9NRR4 USP39-206ENST00000448971 610 ntTSL 322.51■■□□□ 1.191e-6■□□□□ 11
DROSHAQ9NRR4 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.173e-7■□□□□ 11
DROSHAQ9NRR4 NRF1-206ENST00000454688 814 ntTSL 522.36■■□□□ 1.171e-6■□□□□ 11
DROSHAQ9NRR4 SPPL3-204ENST00000536996 763 ntTSL 522.21■■□□□ 1.157e-9■□□□□ 11
DROSHAQ9NRR4 LMAN2-205ENST00000506310 564 ntTSL 421.95■■□□□ 1.17e-9■□□□□ 11
DROSHAQ9NRR4 USP39-220ENST00000613444 2161 ntTSL 2 BASIC21.7■■□□□ 1.061e-6■□□□□ 11
DROSHAQ9NRR4 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.041e-6■□□□□ 11
DROSHAQ9NRR4 USP39-207ENST00000450066 2086 ntTSL 2 BASIC21.51■■□□□ 1.031e-6■□□□□ 11
DROSHAQ9NRR4 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC21.49■■□□□ 1.031e-6■□□□□ 11
DROSHAQ9NRR4 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.011e-6■□□□□ 11
DROSHAQ9NRR4 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.993e-7■□□□□ 11
DROSHAQ9NRR4 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC21.1■□□□□ 0.973e-7■□□□□ 11
DROSHAQ9NRR4 PHF21A-211ENST00000529734 557 ntTSL 421.05■□□□□ 0.967e-9■□□□□ 11
DROSHAQ9NRR4 POLE-213ENST00000539357 364 ntTSL 320.96■□□□□ 0.951e-6■□□□□ 11
DROSHAQ9NRR4 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.941e-6■□□□□ 11
DROSHAQ9NRR4 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.911e-6■□□□□ 11
DROSHAQ9NRR4 PRMT7-226ENST00000569047 648 ntTSL 520.72■□□□□ 0.911e-6■□□□□ 11
DROSHAQ9NRR4 OCIAD1-215ENST00000508996 348 ntTSL 420.63■□□□□ 0.891e-6■□□□□ 11
DROSHAQ9NRR4 ZNF595-203ENST00000608255 1999 ntTSL 2 BASIC20.44■□□□□ 0.861e-13■□□□□ 11
DROSHAQ9NRR4 OCIAD1-220ENST00000509963 432 ntTSL 220.29■□□□□ 0.841e-6■□□□□ 11
DROSHAQ9NRR4 OCIAD1-219ENST00000509664 538 ntTSL 520.21■□□□□ 0.831e-6■□□□□ 11
DROSHAQ9NRR4 MIR611-201ENST00000384869 67 ntBASIC20.16■□□□□ 0.821e-6■□□□□ 11
DROSHAQ9NRR4 PRMT7-209ENST00000563520 839 ntTSL 320.11■□□□□ 0.811e-6■□□□□ 11
DROSHAQ9NRR4 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC19.93■□□□□ 0.781e-6■□□□□ 11
DROSHAQ9NRR4 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.771e-6■□□□□ 11
DROSHAQ9NRR4 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.741e-6■□□□□ 11
DROSHAQ9NRR4 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.747e-9■□□□□ 11
DROSHAQ9NRR4 PRMT7-213ENST00000564441 1011 ntTSL 319.56■□□□□ 0.721e-6■□□□□ 11
DROSHAQ9NRR4 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.71e-6■□□□□ 11
DROSHAQ9NRR4 TJP2-210ENST00000606364 591 ntTSL 419.19■□□□□ 0.661e-6■□□□□ 11
DROSHAQ9NRR4 DAP3-203ENST00000421487 1470 ntTSL 2 BASIC19.1■□□□□ 0.651e-6■□□□□ 11
DROSHAQ9NRR4 OCIAD1-217ENST00000509164 563 ntTSL 418.95■□□□□ 0.621e-6■□□□□ 11
DROSHAQ9NRR4 BLOC1S5-TXNDC5-201ENST00000439343 3030 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.621e-6■□□□□ 11
DROSHAQ9NRR4 CTTN-210ENST00000525852 1470 ntTSL 518.87■□□□□ 0.611e-6■□□□□ 11
DROSHAQ9NRR4 HDGFL2-205ENST00000601353 648 ntTSL 518.83■□□□□ 0.612e-10■□□□□ 11
DROSHAQ9NRR4 OCIAD1-226ENST00000513391 1288 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.581e-6■□□□□ 11
DROSHAQ9NRR4 OCIAD1-228ENST00000514981 653 ntTSL 318.68■□□□□ 0.581e-6■□□□□ 11
DROSHAQ9NRR4 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.581e-13■□□□□ 11
DROSHAQ9NRR4 HSBP1-204ENST00000570259 1020 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.581e-13■□□□□ 11
DROSHAQ9NRR4 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.571e-6■□□□□ 11
DROSHAQ9NRR4 DAP3-225ENST00000535183 1894 ntTSL 2 BASIC18.61■□□□□ 0.571e-6■□□□□ 11
DROSHAQ9NRR4 NRF1-201ENST00000223190 2424 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.561e-6■□□□□ 11
DROSHAQ9NRR4 SUN1-214ENST00000435699 676 ntTSL 318.54■□□□□ 0.562e-18■□□□□ 11
DROSHAQ9NRR4 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.521e-6■□□□□ 11
DROSHAQ9NRR4 NRF1-202ENST00000311967 2481 ntTSL 1 (best) BASIC18.02■□□□□ 0.471e-6■□□□□ 11
DROSHAQ9NRR4 POLR2H-205ENST00000443489 807 ntTSL 2 BASIC17.95■□□□□ 0.461e-6■□□□□ 11
DROSHAQ9NRR4 IMPDH2-210ENST00000485500 852 ntTSL 317.91■□□□□ 0.462e-10■□□□□ 11
DROSHAQ9NRR4 IMPDH2-201ENST00000326739 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.392e-10■□□□□ 11
DROSHAQ9NRR4 POLR2H-202ENST00000429568 878 ntTSL 2 BASIC17.39■□□□□ 0.371e-6■□□□□ 11
DROSHAQ9NRR4 TJP2-211ENST00000636247 3725 ntTSL 1 (best)17.26■□□□□ 0.351e-6■□□□□ 11
DROSHAQ9NRR4 PHF21A-202ENST00000418153 2730 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.347e-9■□□□□ 11
DROSHAQ9NRR4 SUN1-230ENST00000477950 575 ntTSL 317.16■□□□□ 0.342e-18■□□□□ 11
DROSHAQ9NRR4 OCIAD1-205ENST00000444354 1756 ntTSL 3 BASIC17.12■□□□□ 0.331e-6■□□□□ 11
DROSHAQ9NRR4 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.331e-6■□□□□ 11
DROSHAQ9NRR4 CSE1L-202ENST00000396192 3459 ntTSL 5 BASIC16.95■□□□□ 0.37e-9■□□□□ 11
DROSHAQ9NRR4 TMEM9-205ENST00000414605 545 ntTSL 216.93■□□□□ 0.33e-7■□□□□ 11
DROSHAQ9NRR4 CSE1L-201ENST00000262982 3553 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.287e-9■□□□□ 11
DROSHAQ9NRR4 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.281e-6■□□□□ 11
DROSHAQ9NRR4 DAP3-202ENST00000368336 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.281e-6■□□□□ 11
DROSHAQ9NRR4 GIPR-208ENST00000593127 153 ntTSL 516.67■□□□□ 0.267e-9■□□□□ 11
DROSHAQ9NRR4 PRMT7-218ENST00000566341 562 ntTSL 416.66■□□□□ 0.261e-6■□□□□ 11
DROSHAQ9NRR4 OCIAD1-203ENST00000396448 1306 ntTSL 1 (best) BASIC16.64■□□□□ 0.251e-6■□□□□ 11
DROSHAQ9NRR4 OCIAD1-201ENST00000264312 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.241e-6■□□□□ 11
DROSHAQ9NRR4 TJP2-201ENST00000348208 4058 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.211e-6■□□□□ 11
DROSHAQ9NRR4 ZNF595-201ENST00000502981 747 ntTSL 216.34■□□□□ 0.211e-13■□□□□ 11
DROSHAQ9NRR4 ZNF595-202ENST00000509152 1072 ntTSL 1 (best) BASIC16.34■□□□□ 0.211e-13■□□□□ 11
DROSHAQ9NRR4 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.27e-9■□□□□ 11
DROSHAQ9NRR4 NRF1-205ENST00000393232 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.21e-6■□□□□ 11
DROSHAQ9NRR4 YWHAE-209ENST00000572108 258 ntTSL 316.26■□□□□ 0.192e-10■□□□□ 11
DROSHAQ9NRR4 USP39-210ENST00000459775 2148 ntTSL 215.48■□□□□ 0.071e-6■□□□□ 11
DROSHAQ9NRR4 MAP4-206ENST00000423088 899 ntTSL 315.38■□□□□ 0.057e-9■□□□□ 11
DROSHAQ9NRR4 DAP3-222ENST00000496863 742 ntTSL 215.36■□□□□ 0.051e-6■□□□□ 11
DROSHAQ9NRR4 RNF2-202ENST00000367510 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.032e-10■□□□□ 11
DROSHAQ9NRR4 TJP2-203ENST00000377259 588 ntTSL 315.18■□□□□ 0.021e-6■□□□□ 11
DROSHAQ9NRR4 DAP3-211ENST00000470830 439 ntTSL 315.13■□□□□ 0.011e-6■□□□□ 11
DROSHAQ9NRR4 IMPDH2-203ENST00000442157 865 ntTSL 215.04■□□□□ -02e-10■□□□□ 11
DROSHAQ9NRR4 BST2-203ENST00000533098 459 ntTSL 214.94□□□□□ -0.023e-15■□□□□ 11
DROSHAQ9NRR4 DAP3-205ENST00000462002 716 ntTSL 314.91□□□□□ -0.021e-6■□□□□ 11
DROSHAQ9NRR4 USP39-214ENST00000474572 293 ntTSL 414.78□□□□□ -0.041e-6■□□□□ 11
DROSHAQ9NRR4 OCIAD1-212ENST00000507546 496 ntTSL 214.75□□□□□ -0.051e-6■□□□□ 11
DROSHAQ9NRR4 OCIAD1-221ENST00000510824 582 ntTSL 314.75□□□□□ -0.051e-6■□□□□ 11
DROSHAQ9NRR4 MAPK15-205ENST00000475376 351 ntTSL 314.74□□□□□ -0.051e-6■□□□□ 11
DROSHAQ9NRR4 OCIAD1-224ENST00000512236 594 ntTSL 314.71□□□□□ -0.061e-6■□□□□ 11
DROSHAQ9NRR4 POLR2H-206ENST00000452961 791 ntTSL 2 BASIC14.54□□□□□ -0.081e-6■□□□□ 11
DROSHAQ9NRR4 GRK2-209ENST00000530291 324 ntTSL 214.37□□□□□ -0.111e-6■□□□□ 11
DROSHAQ9NRR4 ETFB-202ENST00000354232 3551 ntTSL 1 (best) BASIC14.24□□□□□ -0.131e-6■□□□□ 11
DROSHAQ9NRR4 OCIAD1-210ENST00000506801 571 ntTSL 2 BASIC14.03□□□□□ -0.161e-6■□□□□ 11
DROSHAQ9NRR4 OCIAD1-225ENST00000512981 1209 ntTSL 414.02□□□□□ -0.171e-6■□□□□ 11
DROSHAQ9NRR4 PRMT7-210ENST00000563562 487 ntTSL 513.6□□□□□ -0.231e-6■□□□□ 11
DROSHAQ9NRR4 HSBP1-201ENST00000433866 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.351e-13■□□□□ 11
DROSHAQ9NRR4 OCIAD1-209ENST00000505922 555 ntTSL 512.39□□□□□ -0.431e-6■□□□□ 11
DROSHAQ9NRR4 MAP4-210ENST00000439356 2743 ntTSL 1 (best) BASIC12.12□□□□□ -0.477e-9■□□□□ 11
DROSHAQ9NRR4 PRMT7-204ENST00000561806 543 ntTSL 512.04□□□□□ -0.481e-6■□□□□ 11
DROSHAQ9NRR4 FAM49B-227ENST00000523514 533 ntTSL 411.88□□□□□ -0.517e-9■□□□□ 11
DROSHAQ9NRR4 MAP4-207ENST00000426837 8920 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.557e-9■□□□□ 11
DROSHAQ9NRR4 PHF21A-201ENST00000323180 3675 ntTSL 1 (best) BASIC11.55□□□□□ -0.567e-9■□□□□ 11
DROSHAQ9NRR4 ZNF595-204ENST00000609518 2115 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.561e-13■□□□□ 11
Retrieved 100 of 16,331 protein–RNA pairs in 74.4 ms