Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
POLE3Q9NRF9 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
POLE3Q9NRF9 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
POLE3Q9NRF9 RCN1P1-201ENST00000400413 996 ntBASIC16.49■□□□□ 0.23
POLE3Q9NRF9 AL671277.2-201ENST00000458060 996 ntBASIC16.49■□□□□ 0.23
POLE3Q9NRF9 DUX4L26-201ENST00000489078 1255 ntBASIC16.49■□□□□ 0.23
POLE3Q9NRF9 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.49■□□□□ 0.23
POLE3Q9NRF9 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
POLE3Q9NRF9 VENTXP5-201ENST00000523979 775 ntBASIC16.49■□□□□ 0.23
POLE3Q9NRF9 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
POLE3Q9NRF9 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.49■□□□□ 0.23
POLE3Q9NRF9 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.49■□□□□ 0.23
POLE3Q9NRF9 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
POLE3Q9NRF9 AC005332.8-201ENST00000622750 2735 ntBASIC16.49■□□□□ 0.23
POLE3Q9NRF9 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
POLE3Q9NRF9 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.49■□□□□ 0.23
POLE3Q9NRF9 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
POLE3Q9NRF9 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
POLE3Q9NRF9 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
POLE3Q9NRF9 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
POLE3Q9NRF9 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
POLE3Q9NRF9 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.48■□□□□ 0.23
POLE3Q9NRF9 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
POLE3Q9NRF9 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
POLE3Q9NRF9 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
POLE3Q9NRF9 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
POLE3Q9NRF9 AC011270.2-201ENST00000624293 2550 ntBASIC16.48■□□□□ 0.23
POLE3Q9NRF9 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
POLE3Q9NRF9 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.48■□□□□ 0.23
POLE3Q9NRF9 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
POLE3Q9NRF9 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
POLE3Q9NRF9 AC009949.1-201ENST00000623048 1830 ntBASIC16.48■□□□□ 0.23
POLE3Q9NRF9 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
POLE3Q9NRF9 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
POLE3Q9NRF9 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
POLE3Q9NRF9 TMPOP1-202ENST00000424642 1267 ntBASIC16.48■□□□□ 0.23
POLE3Q9NRF9 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.48■□□□□ 0.23
POLE3Q9NRF9 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.48■□□□□ 0.23
POLE3Q9NRF9 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.48■□□□□ 0.23
POLE3Q9NRF9 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.48■□□□□ 0.23
POLE3Q9NRF9 MTCL1P1-201ENST00000446207 792 ntBASIC16.48■□□□□ 0.23
POLE3Q9NRF9 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.48■□□□□ 0.23
POLE3Q9NRF9 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.48■□□□□ 0.23
POLE3Q9NRF9 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.48■□□□□ 0.23
POLE3Q9NRF9 RN7SL850P-201ENST00000579959 291 ntBASIC16.48■□□□□ 0.23
POLE3Q9NRF9 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.48■□□□□ 0.23
POLE3Q9NRF9 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.48■□□□□ 0.23
POLE3Q9NRF9 AC083849.1-201ENST00000615227 514 ntBASIC16.48■□□□□ 0.23
POLE3Q9NRF9 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.48■□□□□ 0.23
POLE3Q9NRF9 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
POLE3Q9NRF9 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
POLE3Q9NRF9 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
POLE3Q9NRF9 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
POLE3Q9NRF9 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
POLE3Q9NRF9 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.48■□□□□ 0.23
POLE3Q9NRF9 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
POLE3Q9NRF9 HLA-J-201ENST00000462773 1622 ntBASIC16.48■□□□□ 0.23
POLE3Q9NRF9 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
POLE3Q9NRF9 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.48■□□□□ 0.23
POLE3Q9NRF9 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
POLE3Q9NRF9 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
POLE3Q9NRF9 AL138688.1-201ENST00000624851 1594 ntBASIC16.47■□□□□ 0.23
POLE3Q9NRF9 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
POLE3Q9NRF9 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
POLE3Q9NRF9 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
POLE3Q9NRF9 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
POLE3Q9NRF9 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
POLE3Q9NRF9 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
POLE3Q9NRF9 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
POLE3Q9NRF9 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
POLE3Q9NRF9 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
POLE3Q9NRF9 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
POLE3Q9NRF9 AL356309.3-201ENST00000624132 1934 ntBASIC16.47■□□□□ 0.23
POLE3Q9NRF9 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.47■□□□□ 0.23
POLE3Q9NRF9 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
POLE3Q9NRF9 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.47■□□□□ 0.23
POLE3Q9NRF9 BX276092.7-203ENST00000637198 1536 ntBASIC16.47■□□□□ 0.23
POLE3Q9NRF9 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
POLE3Q9NRF9 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
POLE3Q9NRF9 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
POLE3Q9NRF9 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
POLE3Q9NRF9 SPDYE13P-201ENST00000445314 798 ntBASIC16.47■□□□□ 0.23
POLE3Q9NRF9 AC068472.1-201ENST00000474589 881 ntBASIC16.47■□□□□ 0.23
POLE3Q9NRF9 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.47■□□□□ 0.23
POLE3Q9NRF9 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.47■□□□□ 0.23
POLE3Q9NRF9 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.47■□□□□ 0.23
POLE3Q9NRF9 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.47■□□□□ 0.23
POLE3Q9NRF9 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
POLE3Q9NRF9 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
POLE3Q9NRF9 LINC00304-203ENST00000565008 1864 ntBASIC16.47■□□□□ 0.23
POLE3Q9NRF9 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
POLE3Q9NRF9 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
POLE3Q9NRF9 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.47■□□□□ 0.23
POLE3Q9NRF9 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
POLE3Q9NRF9 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
POLE3Q9NRF9 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
POLE3Q9NRF9 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
POLE3Q9NRF9 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
POLE3Q9NRF9 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
POLE3Q9NRF9 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms