Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
SLC52A3Q9NQ40 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.77■□□□□ 0.27
SLC52A3Q9NQ40 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC52A3Q9NQ40 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC52A3Q9NQ40 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC52A3Q9NQ40 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SLC52A3Q9NQ40 AC092053.1-201ENST00000605787 1936 ntBASIC16.76■□□□□ 0.27
SLC52A3Q9NQ40 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC52A3Q9NQ40 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC52A3Q9NQ40 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
SLC52A3Q9NQ40 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC52A3Q9NQ40 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC52A3Q9NQ40 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC52A3Q9NQ40 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC52A3Q9NQ40 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC52A3Q9NQ40 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC52A3Q9NQ40 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC52A3Q9NQ40 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC52A3Q9NQ40 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC52A3Q9NQ40 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC52A3Q9NQ40 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC52A3Q9NQ40 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC52A3Q9NQ40 AP000523.1-201ENST00000398242 1049 ntBASIC16.76■□□□□ 0.27
SLC52A3Q9NQ40 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC52A3Q9NQ40 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC52A3Q9NQ40 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.76■□□□□ 0.27
SLC52A3Q9NQ40 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC52A3Q9NQ40 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC52A3Q9NQ40 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC52A3Q9NQ40 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.76■□□□□ 0.27
SLC52A3Q9NQ40 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC52A3Q9NQ40 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
SLC52A3Q9NQ40 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC52A3Q9NQ40 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC52A3Q9NQ40 AC141257.4-201ENST00000634557 245 ntBASIC16.76■□□□□ 0.27
SLC52A3Q9NQ40 AC136944.6-201ENST00000634818 245 ntBASIC16.76■□□□□ 0.27
SLC52A3Q9NQ40 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC52A3Q9NQ40 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC52A3Q9NQ40 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC52A3Q9NQ40 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SLC52A3Q9NQ40 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC52A3Q9NQ40 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC52A3Q9NQ40 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC52A3Q9NQ40 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC52A3Q9NQ40 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.76■□□□□ 0.27
SLC52A3Q9NQ40 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC52A3Q9NQ40 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC52A3Q9NQ40 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC52A3Q9NQ40 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC52A3Q9NQ40 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC52A3Q9NQ40 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC52A3Q9NQ40 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
SLC52A3Q9NQ40 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC52A3Q9NQ40 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SLC52A3Q9NQ40 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC52A3Q9NQ40 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC52A3Q9NQ40 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC52A3Q9NQ40 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC52A3Q9NQ40 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC52A3Q9NQ40 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
SLC52A3Q9NQ40 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC52A3Q9NQ40 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC52A3Q9NQ40 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC52A3Q9NQ40 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
SLC52A3Q9NQ40 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC52A3Q9NQ40 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC52A3Q9NQ40 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC52A3Q9NQ40 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
SLC52A3Q9NQ40 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC52A3Q9NQ40 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC52A3Q9NQ40 HLA-F-220ENST00000434407 884 ntBASIC16.75■□□□□ 0.27
SLC52A3Q9NQ40 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC52A3Q9NQ40 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC52A3Q9NQ40 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC52A3Q9NQ40 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC52A3Q9NQ40 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.75■□□□□ 0.27
SLC52A3Q9NQ40 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.75■□□□□ 0.27
SLC52A3Q9NQ40 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC52A3Q9NQ40 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.75■□□□□ 0.27
SLC52A3Q9NQ40 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.75■□□□□ 0.27
SLC52A3Q9NQ40 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC52A3Q9NQ40 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
SLC52A3Q9NQ40 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC52A3Q9NQ40 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
SLC52A3Q9NQ40 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC52A3Q9NQ40 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SLC52A3Q9NQ40 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC52A3Q9NQ40 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC52A3Q9NQ40 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC52A3Q9NQ40 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC52A3Q9NQ40 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
SLC52A3Q9NQ40 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
SLC52A3Q9NQ40 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC52A3Q9NQ40 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC52A3Q9NQ40 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC52A3Q9NQ40 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.74■□□□□ 0.27
SLC52A3Q9NQ40 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC52A3Q9NQ40 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SLC52A3Q9NQ40 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC52A3Q9NQ40 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms