Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.74■□□□□ 0.75
VTA1Q9NP79 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.74■□□□□ 0.75
VTA1Q9NP79 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VTA1Q9NP79 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VTA1Q9NP79 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VTA1Q9NP79 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.74■□□□□ 0.75
VTA1Q9NP79 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.74■□□□□ 0.75
VTA1Q9NP79 AC004790.2-201ENST00000623588 572 ntBASIC19.74■□□□□ 0.75
VTA1Q9NP79 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VTA1Q9NP79 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
VTA1Q9NP79 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.74■□□□□ 0.75
VTA1Q9NP79 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.74■□□□□ 0.75
VTA1Q9NP79 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VTA1Q9NP79 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
VTA1Q9NP79 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VTA1Q9NP79 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VTA1Q9NP79 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VTA1Q9NP79 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
VTA1Q9NP79 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
VTA1Q9NP79 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VTA1Q9NP79 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VTA1Q9NP79 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
VTA1Q9NP79 AC097637.2-201ENST00000624096 1997 ntBASIC19.74■□□□□ 0.75
VTA1Q9NP79 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VTA1Q9NP79 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VTA1Q9NP79 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
VTA1Q9NP79 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
VTA1Q9NP79 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
VTA1Q9NP79 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VTA1Q9NP79 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
VTA1Q9NP79 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.73■□□□□ 0.75
VTA1Q9NP79 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
VTA1Q9NP79 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VTA1Q9NP79 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.73■□□□□ 0.75
VTA1Q9NP79 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
VTA1Q9NP79 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
VTA1Q9NP79 AC211486.1-202ENST00000416371 468 ntBASIC19.73■□□□□ 0.75
VTA1Q9NP79 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.73■□□□□ 0.75
VTA1Q9NP79 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC19.73■□□□□ 0.75
VTA1Q9NP79 AC211476.1-201ENST00000503899 468 ntBASIC19.73■□□□□ 0.75
VTA1Q9NP79 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
VTA1Q9NP79 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.73■□□□□ 0.75
VTA1Q9NP79 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.73■□□□□ 0.75
VTA1Q9NP79 AL353135.1-201ENST00000606729 504 ntBASIC19.73■□□□□ 0.75
VTA1Q9NP79 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.73■□□□□ 0.75
VTA1Q9NP79 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
VTA1Q9NP79 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VTA1Q9NP79 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
VTA1Q9NP79 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VTA1Q9NP79 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
VTA1Q9NP79 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VTA1Q9NP79 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
VTA1Q9NP79 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
VTA1Q9NP79 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
VTA1Q9NP79 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VTA1Q9NP79 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VTA1Q9NP79 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VTA1Q9NP79 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.72■□□□□ 0.75
VTA1Q9NP79 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.72■□□□□ 0.75
VTA1Q9NP79 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VTA1Q9NP79 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.72■□□□□ 0.75
VTA1Q9NP79 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VTA1Q9NP79 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VTA1Q9NP79 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VTA1Q9NP79 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
VTA1Q9NP79 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
VTA1Q9NP79 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VTA1Q9NP79 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VTA1Q9NP79 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VTA1Q9NP79 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VTA1Q9NP79 AP006288.1-201ENST00000446065 395 ntBASIC19.72■□□□□ 0.75
VTA1Q9NP79 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.72■□□□□ 0.75
VTA1Q9NP79 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.72■□□□□ 0.75
VTA1Q9NP79 AC005829.1-201ENST00000570002 483 ntBASIC19.72■□□□□ 0.75
VTA1Q9NP79 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
VTA1Q9NP79 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.72■□□□□ 0.75
VTA1Q9NP79 AC010654.1-201ENST00000615722 808 ntBASIC19.72■□□□□ 0.75
VTA1Q9NP79 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
VTA1Q9NP79 AC092865.6-201ENST00000642101 219 ntBASIC19.72■□□□□ 0.75
VTA1Q9NP79 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
VTA1Q9NP79 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VTA1Q9NP79 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
VTA1Q9NP79 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VTA1Q9NP79 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
VTA1Q9NP79 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
VTA1Q9NP79 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
VTA1Q9NP79 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VTA1Q9NP79 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VTA1Q9NP79 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VTA1Q9NP79 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.71■□□□□ 0.75
VTA1Q9NP79 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.71■□□□□ 0.75
VTA1Q9NP79 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VTA1Q9NP79 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VTA1Q9NP79 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VTA1Q9NP79 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VTA1Q9NP79 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VTA1Q9NP79 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.71■□□□□ 0.75
VTA1Q9NP79 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VTA1Q9NP79 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
VTA1Q9NP79 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms