Protein–RNA interactions for Protein: Q9HCJ0

TNRC6C, Trinucleotide repeat-containing gene 6C protein, humanhuman

Known RBP Predictions only

Length 1,690 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6CQ9HCJ0 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC21.67■■□□□ 1.06
TNRC6CQ9HCJ0 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TNRC6CQ9HCJ0 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
TNRC6CQ9HCJ0 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC21.67■■□□□ 1.06
TNRC6CQ9HCJ0 AC135776.1-201ENST00000319817 2481 ntBASIC21.67■■□□□ 1.06
TNRC6CQ9HCJ0 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
TNRC6CQ9HCJ0 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC21.67■■□□□ 1.06
TNRC6CQ9HCJ0 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TNRC6CQ9HCJ0 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TNRC6CQ9HCJ0 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
TNRC6CQ9HCJ0 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
TNRC6CQ9HCJ0 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.66■■□□□ 1.06
TNRC6CQ9HCJ0 AC002558.1-201ENST00000488906 803 ntBASIC21.66■■□□□ 1.06
TNRC6CQ9HCJ0 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
TNRC6CQ9HCJ0 AC096734.2-201ENST00000562054 433 ntBASIC21.66■■□□□ 1.06
TNRC6CQ9HCJ0 INO80C-206ENST00000586489 594 ntTSL 3 BASIC21.66■■□□□ 1.06
TNRC6CQ9HCJ0 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
TNRC6CQ9HCJ0 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNRC6CQ9HCJ0 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
TNRC6CQ9HCJ0 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNRC6CQ9HCJ0 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNRC6CQ9HCJ0 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC21.66■■□□□ 1.06
TNRC6CQ9HCJ0 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TNRC6CQ9HCJ0 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNRC6CQ9HCJ0 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
TNRC6CQ9HCJ0 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
TNRC6CQ9HCJ0 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.66■■□□□ 1.06
TNRC6CQ9HCJ0 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TNRC6CQ9HCJ0 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNRC6CQ9HCJ0 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNRC6CQ9HCJ0 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TNRC6CQ9HCJ0 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC21.66■■□□□ 1.06
TNRC6CQ9HCJ0 SMN2-210ENST00000511812 867 ntTSL 2 BASIC21.66■■□□□ 1.06
TNRC6CQ9HCJ0 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC21.65■■□□□ 1.06
TNRC6CQ9HCJ0 CYP51A1P2-201ENST00000419457 1499 ntBASIC21.65■■□□□ 1.06
TNRC6CQ9HCJ0 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TNRC6CQ9HCJ0 AC006116.8-202ENST00000587620 1550 ntBASIC21.65■■□□□ 1.06
TNRC6CQ9HCJ0 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TNRC6CQ9HCJ0 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
TNRC6CQ9HCJ0 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
TNRC6CQ9HCJ0 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TNRC6CQ9HCJ0 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC21.65■■□□□ 1.06
TNRC6CQ9HCJ0 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TNRC6CQ9HCJ0 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
TNRC6CQ9HCJ0 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
TNRC6CQ9HCJ0 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TNRC6CQ9HCJ0 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TNRC6CQ9HCJ0 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC21.65■■□□□ 1.06
TNRC6CQ9HCJ0 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TNRC6CQ9HCJ0 AC023141.5-201ENST00000458585 616 ntBASIC21.65■■□□□ 1.06
TNRC6CQ9HCJ0 AC093214.1-201ENST00000511688 1107 ntBASIC21.65■■□□□ 1.06
TNRC6CQ9HCJ0 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC21.65■■□□□ 1.06
TNRC6CQ9HCJ0 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TNRC6CQ9HCJ0 AC022145.2-201ENST00000598203 171 ntBASIC21.65■■□□□ 1.06
TNRC6CQ9HCJ0 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TNRC6CQ9HCJ0 AL513210.1-201ENST00000629608 234 ntBASIC21.65■■□□□ 1.06
TNRC6CQ9HCJ0 EFTUD1P1-204ENST00000560401 1798 ntBASIC21.65■■□□□ 1.06
TNRC6CQ9HCJ0 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TNRC6CQ9HCJ0 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TNRC6CQ9HCJ0 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC21.65■■□□□ 1.06
TNRC6CQ9HCJ0 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC21.65■■□□□ 1.06
TNRC6CQ9HCJ0 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.65■■□□□ 1.06
TNRC6CQ9HCJ0 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TNRC6CQ9HCJ0 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC21.64■■□□□ 1.06
TNRC6CQ9HCJ0 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TNRC6CQ9HCJ0 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TNRC6CQ9HCJ0 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TNRC6CQ9HCJ0 BAD-202ENST00000394531 631 ntTSL 3 BASIC21.64■■□□□ 1.05
TNRC6CQ9HCJ0 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC21.64■■□□□ 1.05
TNRC6CQ9HCJ0 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TNRC6CQ9HCJ0 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
TNRC6CQ9HCJ0 AC087163.2-201ENST00000457299 853 ntBASIC21.64■■□□□ 1.05
TNRC6CQ9HCJ0 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC21.64■■□□□ 1.05
TNRC6CQ9HCJ0 AC025580.3-201ENST00000617932 1424 ntBASIC21.64■■□□□ 1.05
TNRC6CQ9HCJ0 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TNRC6CQ9HCJ0 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC21.64■■□□□ 1.05
TNRC6CQ9HCJ0 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
TNRC6CQ9HCJ0 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TNRC6CQ9HCJ0 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC21.64■■□□□ 1.05
TNRC6CQ9HCJ0 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TNRC6CQ9HCJ0 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC21.63■■□□□ 1.05
TNRC6CQ9HCJ0 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC21.63■■□□□ 1.05
TNRC6CQ9HCJ0 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
TNRC6CQ9HCJ0 AC004461.1-201ENST00000412461 403 ntBASIC21.63■■□□□ 1.05
TNRC6CQ9HCJ0 MEIS3P1-201ENST00000495167 958 ntBASIC21.63■■□□□ 1.05
TNRC6CQ9HCJ0 AC109322.1-201ENST00000524499 1264 ntBASIC21.63■■□□□ 1.05
TNRC6CQ9HCJ0 AQP6-203ENST00000551733 849 ntTSL 3 BASIC21.63■■□□□ 1.05
TNRC6CQ9HCJ0 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC21.63■■□□□ 1.05
TNRC6CQ9HCJ0 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC21.63■■□□□ 1.05
TNRC6CQ9HCJ0 YTHDF3-AS1-201ENST00000603538 718 ntBASIC21.63■■□□□ 1.05
TNRC6CQ9HCJ0 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC21.63■■□□□ 1.05
TNRC6CQ9HCJ0 GGTLC5P-201ENST00000617623 998 ntBASIC21.63■■□□□ 1.05
TNRC6CQ9HCJ0 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TNRC6CQ9HCJ0 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TNRC6CQ9HCJ0 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
TNRC6CQ9HCJ0 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TNRC6CQ9HCJ0 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.63■■□□□ 1.05
TNRC6CQ9HCJ0 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TNRC6CQ9HCJ0 USP49-202ENST00000373010 2446 ntTSL 5 BASIC21.63■■□□□ 1.05
TNRC6CQ9HCJ0 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms