Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SSBP3Q9BWW4 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP3Q9BWW4 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP3Q9BWW4 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC14.8□□□□□ -0.04
SSBP3Q9BWW4 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
SSBP3Q9BWW4 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP3Q9BWW4 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
SSBP3Q9BWW4 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SSBP3Q9BWW4 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.8□□□□□ -0.04
SSBP3Q9BWW4 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SSBP3Q9BWW4 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP3Q9BWW4 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
SSBP3Q9BWW4 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP3Q9BWW4 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP3Q9BWW4 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC14.8□□□□□ -0.04
SSBP3Q9BWW4 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP3Q9BWW4 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP3Q9BWW4 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC14.8□□□□□ -0.04
SSBP3Q9BWW4 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
SSBP3Q9BWW4 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP3Q9BWW4 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP3Q9BWW4 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SSBP3Q9BWW4 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSBP3Q9BWW4 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSBP3Q9BWW4 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSBP3Q9BWW4 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSBP3Q9BWW4 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSBP3Q9BWW4 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSBP3Q9BWW4 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.79□□□□□ -0.04
SSBP3Q9BWW4 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC14.79□□□□□ -0.04
SSBP3Q9BWW4 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC14.79□□□□□ -0.04
SSBP3Q9BWW4 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC14.79□□□□□ -0.04
SSBP3Q9BWW4 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSBP3Q9BWW4 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SSBP3Q9BWW4 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.79□□□□□ -0.04
SSBP3Q9BWW4 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.79□□□□□ -0.04
SSBP3Q9BWW4 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSBP3Q9BWW4 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC14.79□□□□□ -0.04
SSBP3Q9BWW4 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSBP3Q9BWW4 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.79□□□□□ -0.04
SSBP3Q9BWW4 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.79□□□□□ -0.04
SSBP3Q9BWW4 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSBP3Q9BWW4 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.79□□□□□ -0.04
SSBP3Q9BWW4 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.79□□□□□ -0.04
SSBP3Q9BWW4 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.79□□□□□ -0.04
SSBP3Q9BWW4 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.79□□□□□ -0.04
SSBP3Q9BWW4 AC011467.2-201ENST00000598425 242 ntBASIC14.79□□□□□ -0.04
SSBP3Q9BWW4 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.79□□□□□ -0.04
SSBP3Q9BWW4 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.79□□□□□ -0.04
SSBP3Q9BWW4 REXO1L6P-202ENST00000619970 1078 ntBASIC14.79□□□□□ -0.04
SSBP3Q9BWW4 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC14.79□□□□□ -0.04
SSBP3Q9BWW4 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC14.79□□□□□ -0.04
SSBP3Q9BWW4 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SSBP3Q9BWW4 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.79□□□□□ -0.04
SSBP3Q9BWW4 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSBP3Q9BWW4 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSBP3Q9BWW4 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
SSBP3Q9BWW4 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SSBP3Q9BWW4 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSBP3Q9BWW4 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SSBP3Q9BWW4 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SSBP3Q9BWW4 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SSBP3Q9BWW4 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC14.78□□□□□ -0.04
SSBP3Q9BWW4 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSBP3Q9BWW4 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SSBP3Q9BWW4 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC14.78□□□□□ -0.04
SSBP3Q9BWW4 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
SSBP3Q9BWW4 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSBP3Q9BWW4 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSBP3Q9BWW4 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSBP3Q9BWW4 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SSBP3Q9BWW4 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.78□□□□□ -0.04
SSBP3Q9BWW4 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SSBP3Q9BWW4 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SSBP3Q9BWW4 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
SSBP3Q9BWW4 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.78□□□□□ -0.04
SSBP3Q9BWW4 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.78□□□□□ -0.04
SSBP3Q9BWW4 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.78□□□□□ -0.04
SSBP3Q9BWW4 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSBP3Q9BWW4 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSBP3Q9BWW4 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SSBP3Q9BWW4 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSBP3Q9BWW4 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSBP3Q9BWW4 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SSBP3Q9BWW4 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SSBP3Q9BWW4 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SSBP3Q9BWW4 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.78□□□□□ -0.04
SSBP3Q9BWW4 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSBP3Q9BWW4 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSBP3Q9BWW4 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14.78□□□□□ -0.04
SSBP3Q9BWW4 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.78□□□□□ -0.04
SSBP3Q9BWW4 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.78□□□□□ -0.04
SSBP3Q9BWW4 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.78□□□□□ -0.04
SSBP3Q9BWW4 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.78□□□□□ -0.04
SSBP3Q9BWW4 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSBP3Q9BWW4 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSBP3Q9BWW4 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSBP3Q9BWW4 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSBP3Q9BWW4 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC14.78□□□□□ -0.04
SSBP3Q9BWW4 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms