Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 REM2-202ENST00000536884 1331 ntTSL 2 BASIC21.54■■□□□ 1.04
CRAMP1Q96RY5 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
CRAMP1Q96RY5 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CRAMP1Q96RY5 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CRAMP1Q96RY5 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CRAMP1Q96RY5 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC21.53■■□□□ 1.04
CRAMP1Q96RY5 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CRAMP1Q96RY5 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.53■■□□□ 1.04
CRAMP1Q96RY5 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC21.53■■□□□ 1.04
CRAMP1Q96RY5 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CRAMP1Q96RY5 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CRAMP1Q96RY5 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CRAMP1Q96RY5 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CRAMP1Q96RY5 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CRAMP1Q96RY5 SYS1-203ENST00000414310 795 ntTSL 3 BASIC21.53■■□□□ 1.04
CRAMP1Q96RY5 ACTG1P4-201ENST00000425123 1122 ntBASIC21.53■■□□□ 1.04
CRAMP1Q96RY5 FAM8A3P-201ENST00000427218 844 ntBASIC21.53■■□□□ 1.04
CRAMP1Q96RY5 CXCL1P1-201ENST00000502804 216 ntBASIC21.53■■□□□ 1.04
CRAMP1Q96RY5 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC21.53■■□□□ 1.04
CRAMP1Q96RY5 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC21.53■■□□□ 1.04
CRAMP1Q96RY5 AC092364.2-202ENST00000597012 1073 ntBASIC21.53■■□□□ 1.04
CRAMP1Q96RY5 AC093028.1-201ENST00000622998 982 ntBASIC21.53■■□□□ 1.04
CRAMP1Q96RY5 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CRAMP1Q96RY5 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC21.53■■□□□ 1.04
CRAMP1Q96RY5 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CRAMP1Q96RY5 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
CRAMP1Q96RY5 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
CRAMP1Q96RY5 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CRAMP1Q96RY5 AL590787.1-201ENST00000568856 1315 ntBASIC21.53■■□□□ 1.04
CRAMP1Q96RY5 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CRAMP1Q96RY5 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.53■■□□□ 1.04
CRAMP1Q96RY5 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CRAMP1Q96RY5 PI4KAP1-204ENST00000612579 1703 ntBASIC21.52■■□□□ 1.04
CRAMP1Q96RY5 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CRAMP1Q96RY5 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CRAMP1Q96RY5 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
CRAMP1Q96RY5 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC21.52■■□□□ 1.04
CRAMP1Q96RY5 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC21.52■■□□□ 1.04
CRAMP1Q96RY5 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CRAMP1Q96RY5 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CRAMP1Q96RY5 NEK7-201ENST00000367383 586 ntTSL 2 BASIC21.52■■□□□ 1.04
CRAMP1Q96RY5 DDT-204ENST00000404092 805 ntTSL 3 BASIC21.52■■□□□ 1.04
CRAMP1Q96RY5 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC21.52■■□□□ 1.04
CRAMP1Q96RY5 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC21.52■■□□□ 1.04
CRAMP1Q96RY5 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC21.52■■□□□ 1.04
CRAMP1Q96RY5 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CRAMP1Q96RY5 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
CRAMP1Q96RY5 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC21.52■■□□□ 1.04
CRAMP1Q96RY5 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CRAMP1Q96RY5 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC21.52■■□□□ 1.03
CRAMP1Q96RY5 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.03
CRAMP1Q96RY5 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CRAMP1Q96RY5 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CRAMP1Q96RY5 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CRAMP1Q96RY5 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CRAMP1Q96RY5 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC21.51■■□□□ 1.03
CRAMP1Q96RY5 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CRAMP1Q96RY5 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC21.51■■□□□ 1.03
CRAMP1Q96RY5 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CRAMP1Q96RY5 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CRAMP1Q96RY5 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CRAMP1Q96RY5 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CRAMP1Q96RY5 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC21.51■■□□□ 1.03
CRAMP1Q96RY5 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CRAMP1Q96RY5 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC21.51■■□□□ 1.03
CRAMP1Q96RY5 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC21.51■■□□□ 1.03
CRAMP1Q96RY5 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC21.51■■□□□ 1.03
CRAMP1Q96RY5 AC004835.2-201ENST00000603762 682 ntBASIC21.51■■□□□ 1.03
CRAMP1Q96RY5 AC105339.1-204ENST00000636249 355 ntBASIC21.51■■□□□ 1.03
CRAMP1Q96RY5 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC21.51■■□□□ 1.03
CRAMP1Q96RY5 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
CRAMP1Q96RY5 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
CRAMP1Q96RY5 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CRAMP1Q96RY5 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
CRAMP1Q96RY5 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CRAMP1Q96RY5 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
CRAMP1Q96RY5 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CRAMP1Q96RY5 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC21.51■■□□□ 1.03
CRAMP1Q96RY5 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC21.51■■□□□ 1.03
CRAMP1Q96RY5 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CRAMP1Q96RY5 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC21.51■■□□□ 1.03
CRAMP1Q96RY5 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CRAMP1Q96RY5 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CRAMP1Q96RY5 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
CRAMP1Q96RY5 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CRAMP1Q96RY5 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CRAMP1Q96RY5 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CRAMP1Q96RY5 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CRAMP1Q96RY5 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CRAMP1Q96RY5 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC21.5■■□□□ 1.03
CRAMP1Q96RY5 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CRAMP1Q96RY5 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC21.5■■□□□ 1.03
CRAMP1Q96RY5 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CRAMP1Q96RY5 MED16-214ENST00000617672 554 ntTSL 5 BASIC21.5■■□□□ 1.03
CRAMP1Q96RY5 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.5■■□□□ 1.03
CRAMP1Q96RY5 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC21.5■■□□□ 1.03
CRAMP1Q96RY5 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CRAMP1Q96RY5 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC21.5■■□□□ 1.03
CRAMP1Q96RY5 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CRAMP1Q96RY5 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms