Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC5.33□□□□□ -1.56
HMCN1Q96RW7 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HMCN1Q96RW7 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC5.33□□□□□ -1.56
HMCN1Q96RW7 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC5.33□□□□□ -1.56
HMCN1Q96RW7 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
HMCN1Q96RW7 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HMCN1Q96RW7 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC5.33□□□□□ -1.56
HMCN1Q96RW7 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HMCN1Q96RW7 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC5.33□□□□□ -1.56
HMCN1Q96RW7 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC5.33□□□□□ -1.56
HMCN1Q96RW7 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC5.33□□□□□ -1.56
HMCN1Q96RW7 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC5.33□□□□□ -1.56
HMCN1Q96RW7 AC004840.1-201ENST00000636359 365 ntBASIC5.33□□□□□ -1.56
HMCN1Q96RW7 AF106564.1-201ENST00000607058 2553 ntBASIC5.33□□□□□ -1.56
HMCN1Q96RW7 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC5.33□□□□□ -1.56
HMCN1Q96RW7 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
HMCN1Q96RW7 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HMCN1Q96RW7 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
HMCN1Q96RW7 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
HMCN1Q96RW7 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HMCN1Q96RW7 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC5.33□□□□□ -1.56
HMCN1Q96RW7 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC5.33□□□□□ -1.56
HMCN1Q96RW7 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HMCN1Q96RW7 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HMCN1Q96RW7 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
HMCN1Q96RW7 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HMCN1Q96RW7 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC5.33□□□□□ -1.56
HMCN1Q96RW7 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC5.33□□□□□ -1.56
HMCN1Q96RW7 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC5.33□□□□□ -1.56
HMCN1Q96RW7 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
HMCN1Q96RW7 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC5.33□□□□□ -1.56
HMCN1Q96RW7 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC5.33□□□□□ -1.56
HMCN1Q96RW7 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC5.33□□□□□ -1.56
HMCN1Q96RW7 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HMCN1Q96RW7 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC5.33□□□□□ -1.56
HMCN1Q96RW7 AP001527.2-201ENST00000614441 631 ntBASIC5.33□□□□□ -1.56
HMCN1Q96RW7 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC5.33□□□□□ -1.56
HMCN1Q96RW7 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
HMCN1Q96RW7 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HMCN1Q96RW7 AC020931.1-201ENST00000589622 1346 ntBASIC5.33□□□□□ -1.56
HMCN1Q96RW7 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
HMCN1Q96RW7 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HMCN1Q96RW7 ME2-208ENST00000638937 2471 ntTSL 5 BASIC5.33□□□□□ -1.56
HMCN1Q96RW7 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
HMCN1Q96RW7 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC5.33□□□□□ -1.56
HMCN1Q96RW7 BTBD7P1-201ENST00000447253 1453 ntBASIC5.33□□□□□ -1.56
HMCN1Q96RW7 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC5.33□□□□□ -1.56
HMCN1Q96RW7 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 KRT18P65-201ENST00000439811 1286 ntBASIC5.32□□□□□ -1.56
HMCN1Q96RW7 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 CD81-207ENST00000481687 890 ntTSL 2 BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 S100A2-206ENST00000497140 697 ntTSL 2 BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 AC011495.1-201ENST00000498085 584 ntBASIC5.32□□□□□ -1.56
HMCN1Q96RW7 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 DGAT2L7P-201ENST00000602462 744 ntBASIC5.32□□□□□ -1.56
HMCN1Q96RW7 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 AC132938.6-201ENST00000623828 1655 ntBASIC5.32□□□□□ -1.56
HMCN1Q96RW7 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
HMCN1Q96RW7 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms