Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 AC109462.3-201ENST00000573934 613 ntBASIC21.95■■□□□ 1.1
CCDC85AQ96PX6 AC027601.4-201ENST00000611259 610 ntBASIC21.95■■□□□ 1.1
CCDC85AQ96PX6 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
CCDC85AQ96PX6 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC21.95■■□□□ 1.1
CCDC85AQ96PX6 AC073592.4-201ENST00000623827 446 ntBASIC21.95■■□□□ 1.1
CCDC85AQ96PX6 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC85AQ96PX6 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC85AQ96PX6 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
CCDC85AQ96PX6 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
CCDC85AQ96PX6 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC21.95■■□□□ 1.1
CCDC85AQ96PX6 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC85AQ96PX6 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC85AQ96PX6 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC85AQ96PX6 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC85AQ96PX6 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCDC85AQ96PX6 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
CCDC85AQ96PX6 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC85AQ96PX6 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC21.94■■□□□ 1.1
CCDC85AQ96PX6 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC85AQ96PX6 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC85AQ96PX6 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC85AQ96PX6 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC85AQ96PX6 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
CCDC85AQ96PX6 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CCDC85AQ96PX6 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC21.94■■□□□ 1.1
CCDC85AQ96PX6 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC21.94■■□□□ 1.1
CCDC85AQ96PX6 AC103564.2-201ENST00000432853 1299 ntBASIC21.94■■□□□ 1.1
CCDC85AQ96PX6 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC21.94■■□□□ 1.1
CCDC85AQ96PX6 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC85AQ96PX6 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC21.94■■□□□ 1.1
CCDC85AQ96PX6 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC21.94■■□□□ 1.1
CCDC85AQ96PX6 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC21.94■■□□□ 1.1
CCDC85AQ96PX6 AC019129.2-201ENST00000609837 1235 ntBASIC21.94■■□□□ 1.1
CCDC85AQ96PX6 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC85AQ96PX6 CAND2-206ENST00000626378 333 ntTSL 5 BASIC21.94■■□□□ 1.1
CCDC85AQ96PX6 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC85AQ96PX6 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC85AQ96PX6 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC85AQ96PX6 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.94■■□□□ 1.1
CCDC85AQ96PX6 MADD-208ENST00000405573 1823 ntTSL 5 BASIC21.94■■□□□ 1.1
CCDC85AQ96PX6 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCDC85AQ96PX6 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC85AQ96PX6 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC85AQ96PX6 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC85AQ96PX6 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC85AQ96PX6 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC85AQ96PX6 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC85AQ96PX6 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC85AQ96PX6 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC21.93■■□□□ 1.1
CCDC85AQ96PX6 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC85AQ96PX6 BX842568.4-201ENST00000421222 227 ntBASIC21.93■■□□□ 1.1
CCDC85AQ96PX6 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC85AQ96PX6 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC21.93■■□□□ 1.1
CCDC85AQ96PX6 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC85AQ96PX6 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC21.93■■□□□ 1.1
CCDC85AQ96PX6 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC21.93■■□□□ 1.1
CCDC85AQ96PX6 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC85AQ96PX6 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC21.93■■□□□ 1.1
CCDC85AQ96PX6 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC21.93■■□□□ 1.1
CCDC85AQ96PX6 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC21.93■■□□□ 1.1
CCDC85AQ96PX6 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC21.93■■□□□ 1.1
CCDC85AQ96PX6 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC85AQ96PX6 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC85AQ96PX6 AL353593.2-201ENST00000602529 1483 ntBASIC21.93■■□□□ 1.1
CCDC85AQ96PX6 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC85AQ96PX6 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC21.93■■□□□ 1.1
CCDC85AQ96PX6 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC21.93■■□□□ 1.1
CCDC85AQ96PX6 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC21.93■■□□□ 1.1
CCDC85AQ96PX6 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
CCDC85AQ96PX6 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC85AQ96PX6 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC85AQ96PX6 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC85AQ96PX6 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CCDC85AQ96PX6 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC85AQ96PX6 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
CCDC85AQ96PX6 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC21.92■■□□□ 1.1
CCDC85AQ96PX6 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC85AQ96PX6 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC85AQ96PX6 PC-208ENST00000529047 1607 ntTSL 3 BASIC21.92■■□□□ 1.1
CCDC85AQ96PX6 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.92■■□□□ 1.1
CCDC85AQ96PX6 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC85AQ96PX6 AC009947.1-201ENST00000444350 727 ntBASIC21.92■■□□□ 1.1
CCDC85AQ96PX6 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
CCDC85AQ96PX6 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC85AQ96PX6 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC21.92■■□□□ 1.1
CCDC85AQ96PX6 COX5A-202ENST00000562233 441 ntTSL 3 BASIC21.92■■□□□ 1.1
CCDC85AQ96PX6 AL139424.1-201ENST00000607572 797 ntBASIC21.92■■□□□ 1.1
CCDC85AQ96PX6 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC21.92■■□□□ 1.1
CCDC85AQ96PX6 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC21.92■■□□□ 1.1
CCDC85AQ96PX6 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC21.92■■□□□ 1.1
CCDC85AQ96PX6 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC21.92■■□□□ 1.1
CCDC85AQ96PX6 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
CCDC85AQ96PX6 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC85AQ96PX6 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC85AQ96PX6 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC85AQ96PX6 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC21.91■■□□□ 1.1
CCDC85AQ96PX6 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC85AQ96PX6 FUT8-AS1-201ENST00000621019 1521 ntBASIC21.91■■□□□ 1.1
CCDC85AQ96PX6 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC85AQ96PX6 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms