Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHAMP1Q96JM3 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CHAMP1Q96JM3 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.56■□□□□ 0.88
CHAMP1Q96JM3 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.56■□□□□ 0.88
CHAMP1Q96JM3 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHAMP1Q96JM3 KRT18P35-201ENST00000510488 1269 ntBASIC20.56■□□□□ 0.88
CHAMP1Q96JM3 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.56■□□□□ 0.88
CHAMP1Q96JM3 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.56■□□□□ 0.88
CHAMP1Q96JM3 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CHAMP1Q96JM3 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHAMP1Q96JM3 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.56■□□□□ 0.88
CHAMP1Q96JM3 AC010653.2-201ENST00000623505 997 ntBASIC20.56■□□□□ 0.88
CHAMP1Q96JM3 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHAMP1Q96JM3 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHAMP1Q96JM3 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.56■□□□□ 0.88
CHAMP1Q96JM3 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHAMP1Q96JM3 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHAMP1Q96JM3 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHAMP1Q96JM3 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHAMP1Q96JM3 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHAMP1Q96JM3 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CHAMP1Q96JM3 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHAMP1Q96JM3 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.55■□□□□ 0.88
CHAMP1Q96JM3 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHAMP1Q96JM3 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHAMP1Q96JM3 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHAMP1Q96JM3 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CHAMP1Q96JM3 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHAMP1Q96JM3 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHAMP1Q96JM3 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC20.55■□□□□ 0.88
CHAMP1Q96JM3 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHAMP1Q96JM3 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHAMP1Q96JM3 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC20.55■□□□□ 0.88
CHAMP1Q96JM3 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CHAMP1Q96JM3 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC20.55■□□□□ 0.88
CHAMP1Q96JM3 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHAMP1Q96JM3 AC005915.1-201ENST00000624912 2018 ntBASIC20.55■□□□□ 0.88
CHAMP1Q96JM3 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.55■□□□□ 0.88
CHAMP1Q96JM3 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.55■□□□□ 0.88
CHAMP1Q96JM3 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
CHAMP1Q96JM3 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.55■□□□□ 0.88
CHAMP1Q96JM3 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHAMP1Q96JM3 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.55■□□□□ 0.88
CHAMP1Q96JM3 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.55■□□□□ 0.88
CHAMP1Q96JM3 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHAMP1Q96JM3 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.55■□□□□ 0.88
CHAMP1Q96JM3 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHAMP1Q96JM3 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.55■□□□□ 0.88
CHAMP1Q96JM3 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.55■□□□□ 0.88
CHAMP1Q96JM3 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.55■□□□□ 0.88
CHAMP1Q96JM3 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.55■□□□□ 0.88
CHAMP1Q96JM3 AC009065.1-201ENST00000564055 1225 ntBASIC20.55■□□□□ 0.88
CHAMP1Q96JM3 C2orf69P3-201ENST00000565542 1120 ntBASIC20.55■□□□□ 0.88
CHAMP1Q96JM3 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.55■□□□□ 0.88
CHAMP1Q96JM3 MIR4785-201ENST00000585005 73 ntBASIC20.55■□□□□ 0.88
CHAMP1Q96JM3 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.55■□□□□ 0.88
CHAMP1Q96JM3 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.55■□□□□ 0.88
CHAMP1Q96JM3 FUK-207ENST00000571514 3054 ntTSL 2 BASIC20.55■□□□□ 0.88
CHAMP1Q96JM3 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.55■□□□□ 0.88
CHAMP1Q96JM3 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC20.55■□□□□ 0.88
CHAMP1Q96JM3 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHAMP1Q96JM3 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHAMP1Q96JM3 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CHAMP1Q96JM3 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC20.55■□□□□ 0.88
CHAMP1Q96JM3 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHAMP1Q96JM3 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHAMP1Q96JM3 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHAMP1Q96JM3 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHAMP1Q96JM3 LINC02199-201ENST00000506655 2702 ntBASIC20.55■□□□□ 0.88
CHAMP1Q96JM3 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHAMP1Q96JM3 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHAMP1Q96JM3 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CHAMP1Q96JM3 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CHAMP1Q96JM3 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CHAMP1Q96JM3 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CHAMP1Q96JM3 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC20.54■□□□□ 0.88
CHAMP1Q96JM3 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHAMP1Q96JM3 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHAMP1Q96JM3 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHAMP1Q96JM3 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHAMP1Q96JM3 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHAMP1Q96JM3 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.54■□□□□ 0.88
CHAMP1Q96JM3 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHAMP1Q96JM3 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.54■□□□□ 0.88
CHAMP1Q96JM3 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.54■□□□□ 0.88
CHAMP1Q96JM3 AC079602.3-201ENST00000623931 403 ntBASIC20.54■□□□□ 0.88
CHAMP1Q96JM3 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHAMP1Q96JM3 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHAMP1Q96JM3 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CHAMP1Q96JM3 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHAMP1Q96JM3 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
CHAMP1Q96JM3 LYSMD4-203ENST00000378904 2122 ntBASIC20.54■□□□□ 0.88
CHAMP1Q96JM3 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHAMP1Q96JM3 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC20.54■□□□□ 0.88
CHAMP1Q96JM3 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
CHAMP1Q96JM3 RNF216P1-203ENST00000404404 2427 ntBASIC20.54■□□□□ 0.88
CHAMP1Q96JM3 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHAMP1Q96JM3 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHAMP1Q96JM3 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHAMP1Q96JM3 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms