Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP6Q96FZ7 KRT18P29-201ENST00000397031 1267 ntBASIC17.88■□□□□ 0.45
CHMP6Q96FZ7 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.88■□□□□ 0.45
CHMP6Q96FZ7 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.88■□□□□ 0.45
CHMP6Q96FZ7 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.88■□□□□ 0.45
CHMP6Q96FZ7 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP6Q96FZ7 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CHMP6Q96FZ7 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP6Q96FZ7 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.88■□□□□ 0.45
CHMP6Q96FZ7 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP6Q96FZ7 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
CHMP6Q96FZ7 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CHMP6Q96FZ7 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CHMP6Q96FZ7 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.88■□□□□ 0.45
CHMP6Q96FZ7 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.88■□□□□ 0.45
CHMP6Q96FZ7 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.88■□□□□ 0.45
CHMP6Q96FZ7 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP6Q96FZ7 AC026691.1-201ENST00000602502 2017 ntBASIC17.88■□□□□ 0.45
CHMP6Q96FZ7 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CHMP6Q96FZ7 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP6Q96FZ7 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.87■□□□□ 0.45
CHMP6Q96FZ7 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP6Q96FZ7 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP6Q96FZ7 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP6Q96FZ7 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP6Q96FZ7 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CHMP6Q96FZ7 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.87■□□□□ 0.45
CHMP6Q96FZ7 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CHMP6Q96FZ7 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP6Q96FZ7 AL513477.1-201ENST00000602865 2407 ntBASIC17.87■□□□□ 0.45
CHMP6Q96FZ7 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP6Q96FZ7 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.87■□□□□ 0.45
CHMP6Q96FZ7 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP6Q96FZ7 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP6Q96FZ7 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
CHMP6Q96FZ7 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP6Q96FZ7 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.87■□□□□ 0.45
CHMP6Q96FZ7 AP002982.1-201ENST00000492365 877 ntBASIC17.87■□□□□ 0.45
CHMP6Q96FZ7 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.87■□□□□ 0.45
CHMP6Q96FZ7 DUTP2-201ENST00000519164 463 ntBASIC17.87■□□□□ 0.45
CHMP6Q96FZ7 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP6Q96FZ7 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.87■□□□□ 0.45
CHMP6Q96FZ7 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.87■□□□□ 0.45
CHMP6Q96FZ7 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP6Q96FZ7 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP6Q96FZ7 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP6Q96FZ7 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP6Q96FZ7 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CHMP6Q96FZ7 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.87■□□□□ 0.45
CHMP6Q96FZ7 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
CHMP6Q96FZ7 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP6Q96FZ7 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP6Q96FZ7 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP6Q96FZ7 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.87■□□□□ 0.45
CHMP6Q96FZ7 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.87■□□□□ 0.45
CHMP6Q96FZ7 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP6Q96FZ7 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP6Q96FZ7 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.87■□□□□ 0.45
CHMP6Q96FZ7 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.86■□□□□ 0.45
CHMP6Q96FZ7 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP6Q96FZ7 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CHMP6Q96FZ7 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
CHMP6Q96FZ7 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP6Q96FZ7 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CHMP6Q96FZ7 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CHMP6Q96FZ7 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.86■□□□□ 0.45
CHMP6Q96FZ7 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP6Q96FZ7 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP6Q96FZ7 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP6Q96FZ7 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.86■□□□□ 0.45
CHMP6Q96FZ7 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CHMP6Q96FZ7 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.86■□□□□ 0.45
CHMP6Q96FZ7 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CHMP6Q96FZ7 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP6Q96FZ7 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP6Q96FZ7 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP6Q96FZ7 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.86■□□□□ 0.45
CHMP6Q96FZ7 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP6Q96FZ7 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CHMP6Q96FZ7 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP6Q96FZ7 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CHMP6Q96FZ7 TSPY20P-201ENST00000450910 630 ntBASIC17.86■□□□□ 0.45
CHMP6Q96FZ7 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP6Q96FZ7 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP6Q96FZ7 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.86■□□□□ 0.45
CHMP6Q96FZ7 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.86■□□□□ 0.45
CHMP6Q96FZ7 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.86■□□□□ 0.45
CHMP6Q96FZ7 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.86■□□□□ 0.45
CHMP6Q96FZ7 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP6Q96FZ7 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP6Q96FZ7 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP6Q96FZ7 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP6Q96FZ7 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.86■□□□□ 0.45
CHMP6Q96FZ7 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CHMP6Q96FZ7 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CHMP6Q96FZ7 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP6Q96FZ7 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.86■□□□□ 0.45
CHMP6Q96FZ7 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP6Q96FZ7 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP6Q96FZ7 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms