Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIPA1Q96FS4 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIPA1Q96FS4 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SIPA1Q96FS4 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.73■□□□□ 0.43
SIPA1Q96FS4 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIPA1Q96FS4 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIPA1Q96FS4 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SIPA1Q96FS4 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIPA1Q96FS4 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIPA1Q96FS4 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.73■□□□□ 0.43
SIPA1Q96FS4 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.73■□□□□ 0.43
SIPA1Q96FS4 AC009947.1-201ENST00000444350 727 ntBASIC17.73■□□□□ 0.43
SIPA1Q96FS4 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SIPA1Q96FS4 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SIPA1Q96FS4 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.73■□□□□ 0.43
SIPA1Q96FS4 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SIPA1Q96FS4 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.73■□□□□ 0.43
SIPA1Q96FS4 AC116407.2-201ENST00000613639 860 ntBASIC17.73■□□□□ 0.43
SIPA1Q96FS4 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SIPA1Q96FS4 AL353593.2-201ENST00000602529 1483 ntBASIC17.73■□□□□ 0.43
SIPA1Q96FS4 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIPA1Q96FS4 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIPA1Q96FS4 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SIPA1Q96FS4 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIPA1Q96FS4 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SIPA1Q96FS4 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.72■□□□□ 0.43
SIPA1Q96FS4 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIPA1Q96FS4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
SIPA1Q96FS4 AC090340.1-201ENST00000620778 4980 ntBASIC17.72■□□□□ 0.43
SIPA1Q96FS4 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIPA1Q96FS4 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIPA1Q96FS4 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
SIPA1Q96FS4 AL049757.1-201ENST00000616842 1596 ntBASIC17.72■□□□□ 0.43
SIPA1Q96FS4 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIPA1Q96FS4 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.72■□□□□ 0.43
SIPA1Q96FS4 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SIPA1Q96FS4 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.72■□□□□ 0.43
SIPA1Q96FS4 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SIPA1Q96FS4 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.72■□□□□ 0.43
SIPA1Q96FS4 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.72■□□□□ 0.43
SIPA1Q96FS4 AC005104.2-201ENST00000427818 678 ntBASIC17.72■□□□□ 0.43
SIPA1Q96FS4 AC007967.2-201ENST00000432613 625 ntBASIC17.72■□□□□ 0.43
SIPA1Q96FS4 AC136632.2-201ENST00000512891 861 ntBASIC17.72■□□□□ 0.43
SIPA1Q96FS4 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.72■□□□□ 0.43
SIPA1Q96FS4 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.72■□□□□ 0.43
SIPA1Q96FS4 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.72■□□□□ 0.43
SIPA1Q96FS4 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.72■□□□□ 0.43
SIPA1Q96FS4 AC040169.1-201ENST00000565382 521 ntBASIC17.72■□□□□ 0.43
SIPA1Q96FS4 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.72■□□□□ 0.43
SIPA1Q96FS4 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.72■□□□□ 0.43
SIPA1Q96FS4 AL589182.2-201ENST00000619332 1049 ntBASIC17.72■□□□□ 0.43
SIPA1Q96FS4 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SIPA1Q96FS4 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.72■□□□□ 0.43
SIPA1Q96FS4 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIPA1Q96FS4 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SIPA1Q96FS4 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIPA1Q96FS4 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIPA1Q96FS4 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIPA1Q96FS4 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIPA1Q96FS4 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.72■□□□□ 0.43
SIPA1Q96FS4 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.72■□□□□ 0.43
SIPA1Q96FS4 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.71■□□□□ 0.43
SIPA1Q96FS4 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIPA1Q96FS4 AC093677.2-201ENST00000600169 1863 ntBASIC17.71■□□□□ 0.43
SIPA1Q96FS4 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIPA1Q96FS4 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIPA1Q96FS4 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIPA1Q96FS4 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIPA1Q96FS4 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIPA1Q96FS4 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.71■□□□□ 0.43
SIPA1Q96FS4 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.71■□□□□ 0.43
SIPA1Q96FS4 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIPA1Q96FS4 AC073621.1-201ENST00000392730 636 ntBASIC17.71■□□□□ 0.43
SIPA1Q96FS4 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SIPA1Q96FS4 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.71■□□□□ 0.43
SIPA1Q96FS4 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.71■□□□□ 0.43
SIPA1Q96FS4 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.71■□□□□ 0.43
SIPA1Q96FS4 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.71■□□□□ 0.43
SIPA1Q96FS4 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.71■□□□□ 0.43
SIPA1Q96FS4 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.71■□□□□ 0.43
SIPA1Q96FS4 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
SIPA1Q96FS4 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.71■□□□□ 0.43
SIPA1Q96FS4 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.71■□□□□ 0.43
SIPA1Q96FS4 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIPA1Q96FS4 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.71■□□□□ 0.43
SIPA1Q96FS4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.71■□□□□ 0.43
SIPA1Q96FS4 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIPA1Q96FS4 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SIPA1Q96FS4 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIPA1Q96FS4 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.71■□□□□ 0.43
SIPA1Q96FS4 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIPA1Q96FS4 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIPA1Q96FS4 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIPA1Q96FS4 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SIPA1Q96FS4 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIPA1Q96FS4 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SIPA1Q96FS4 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.71■□□□□ 0.43
SIPA1Q96FS4 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIPA1Q96FS4 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
SIPA1Q96FS4 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms