Protein–RNA interactions for Protein: Q969F2

NKD2, Protein naked cuticle homolog 2, humanhuman

Predicted RBP Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKD2Q969F2 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NKD2Q969F2 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NKD2Q969F2 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.75■□□□□ 0.59
NKD2Q969F2 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
NKD2Q969F2 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.75■□□□□ 0.59
NKD2Q969F2 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NKD2Q969F2 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NKD2Q969F2 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NKD2Q969F2 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
NKD2Q969F2 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.75■□□□□ 0.59
NKD2Q969F2 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.75■□□□□ 0.59
NKD2Q969F2 AC139887.3-201ENST00000568585 713 ntBASIC18.75■□□□□ 0.59
NKD2Q969F2 AC010240.3-201ENST00000607688 395 ntBASIC18.75■□□□□ 0.59
NKD2Q969F2 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.75■□□□□ 0.59
NKD2Q969F2 AC148477.8-201ENST00000624298 468 ntBASIC18.75■□□□□ 0.59
NKD2Q969F2 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NKD2Q969F2 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.75■□□□□ 0.59
NKD2Q969F2 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NKD2Q969F2 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NKD2Q969F2 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.75■□□□□ 0.59
NKD2Q969F2 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NKD2Q969F2 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NKD2Q969F2 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NKD2Q969F2 AC012317.2-201ENST00000623305 2251 ntBASIC18.75■□□□□ 0.59
NKD2Q969F2 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.74■□□□□ 0.59
NKD2Q969F2 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NKD2Q969F2 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NKD2Q969F2 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
NKD2Q969F2 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NKD2Q969F2 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NKD2Q969F2 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NKD2Q969F2 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.74■□□□□ 0.59
NKD2Q969F2 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
NKD2Q969F2 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NKD2Q969F2 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NKD2Q969F2 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.74■□□□□ 0.59
NKD2Q969F2 AC010327.4-202ENST00000591484 748 ntBASIC18.74■□□□□ 0.59
NKD2Q969F2 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.74■□□□□ 0.59
NKD2Q969F2 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
NKD2Q969F2 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NKD2Q969F2 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NKD2Q969F2 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NKD2Q969F2 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.73■□□□□ 0.59
NKD2Q969F2 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NKD2Q969F2 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NKD2Q969F2 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NKD2Q969F2 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
NKD2Q969F2 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NKD2Q969F2 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.73■□□□□ 0.59
NKD2Q969F2 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.73■□□□□ 0.59
NKD2Q969F2 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NKD2Q969F2 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NKD2Q969F2 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NKD2Q969F2 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NKD2Q969F2 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NKD2Q969F2 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NKD2Q969F2 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.73■□□□□ 0.59
NKD2Q969F2 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NKD2Q969F2 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.73■□□□□ 0.59
NKD2Q969F2 DUTP2-201ENST00000519164 463 ntBASIC18.73■□□□□ 0.59
NKD2Q969F2 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.73■□□□□ 0.59
NKD2Q969F2 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.73■□□□□ 0.59
NKD2Q969F2 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
NKD2Q969F2 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.73■□□□□ 0.59
NKD2Q969F2 AL390719.2-201ENST00000606993 987 ntBASIC18.73■□□□□ 0.59
NKD2Q969F2 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NKD2Q969F2 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.73■□□□□ 0.59
NKD2Q969F2 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.73■□□□□ 0.59
NKD2Q969F2 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.73■□□□□ 0.59
NKD2Q969F2 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.73■□□□□ 0.59
NKD2Q969F2 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NKD2Q969F2 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
NKD2Q969F2 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
NKD2Q969F2 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NKD2Q969F2 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NKD2Q969F2 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NKD2Q969F2 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.73■□□□□ 0.59
NKD2Q969F2 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.73■□□□□ 0.59
NKD2Q969F2 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NKD2Q969F2 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NKD2Q969F2 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.72■□□□□ 0.59
NKD2Q969F2 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.72■□□□□ 0.59
NKD2Q969F2 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NKD2Q969F2 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NKD2Q969F2 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NKD2Q969F2 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NKD2Q969F2 LTB4R2-202ENST00000528054 3092 ntBASIC18.72■□□□□ 0.59
NKD2Q969F2 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NKD2Q969F2 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NKD2Q969F2 SEC1P-202ENST00000473944 940 ntBASIC18.72■□□□□ 0.59
NKD2Q969F2 VENTXP7-201ENST00000475503 772 ntBASIC18.72■□□□□ 0.59
NKD2Q969F2 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.72■□□□□ 0.59
NKD2Q969F2 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.72■□□□□ 0.59
NKD2Q969F2 MIR3687-2-201ENST00000577708 61 ntBASIC18.72■□□□□ 0.59
NKD2Q969F2 MIR3687-1-201ENST00000614492 61 ntBASIC18.72■□□□□ 0.59
NKD2Q969F2 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
NKD2Q969F2 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NKD2Q969F2 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
NKD2Q969F2 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NKD2Q969F2 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms