Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ATP6V0A1Q93050 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP6V0A1Q93050 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
ATP6V0A1Q93050 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP6V0A1Q93050 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP6V0A1Q93050 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ATP6V0A1Q93050 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP6V0A1Q93050 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP6V0A1Q93050 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
ATP6V0A1Q93050 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP6V0A1Q93050 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC19.82■□□□□ 0.76
ATP6V0A1Q93050 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.81■□□□□ 0.76
ATP6V0A1Q93050 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP6V0A1Q93050 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.81■□□□□ 0.76
ATP6V0A1Q93050 AC009949.1-201ENST00000623048 1830 ntBASIC19.81■□□□□ 0.76
ATP6V0A1Q93050 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP6V0A1Q93050 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP6V0A1Q93050 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.81■□□□□ 0.76
ATP6V0A1Q93050 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP6V0A1Q93050 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ATP6V0A1Q93050 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ATP6V0A1Q93050 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
ATP6V0A1Q93050 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.81■□□□□ 0.76
ATP6V0A1Q93050 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP6V0A1Q93050 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC19.81■□□□□ 0.76
ATP6V0A1Q93050 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.81■□□□□ 0.76
ATP6V0A1Q93050 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.81■□□□□ 0.76
ATP6V0A1Q93050 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.81■□□□□ 0.76
ATP6V0A1Q93050 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC19.81■□□□□ 0.76
ATP6V0A1Q93050 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.81■□□□□ 0.76
ATP6V0A1Q93050 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.81■□□□□ 0.76
ATP6V0A1Q93050 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.81■□□□□ 0.76
ATP6V0A1Q93050 PIN1-206ENST00000587625 878 ntTSL 2 BASIC19.81■□□□□ 0.76
ATP6V0A1Q93050 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP6V0A1Q93050 TERC-201ENST00000602385 541 ntBASIC19.81■□□□□ 0.76
ATP6V0A1Q93050 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ATP6V0A1Q93050 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP6V0A1Q93050 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.81■□□□□ 0.76
ATP6V0A1Q93050 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP6V0A1Q93050 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.81■□□□□ 0.76
ATP6V0A1Q93050 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATP6V0A1Q93050 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATP6V0A1Q93050 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATP6V0A1Q93050 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ATP6V0A1Q93050 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ATP6V0A1Q93050 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
ATP6V0A1Q93050 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ATP6V0A1Q93050 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
ATP6V0A1Q93050 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATP6V0A1Q93050 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.8■□□□□ 0.76
ATP6V0A1Q93050 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ATP6V0A1Q93050 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.8■□□□□ 0.76
ATP6V0A1Q93050 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.8■□□□□ 0.76
ATP6V0A1Q93050 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.8■□□□□ 0.76
ATP6V0A1Q93050 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.8■□□□□ 0.76
ATP6V0A1Q93050 AC103564.2-201ENST00000432853 1299 ntBASIC19.8■□□□□ 0.76
ATP6V0A1Q93050 OR7E14P-202ENST00000530490 1290 ntBASIC19.8■□□□□ 0.76
ATP6V0A1Q93050 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.8■□□□□ 0.76
ATP6V0A1Q93050 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.8■□□□□ 0.76
ATP6V0A1Q93050 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.8■□□□□ 0.76
ATP6V0A1Q93050 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.8■□□□□ 0.76
ATP6V0A1Q93050 AL139288.1-201ENST00000623748 933 ntBASIC19.8■□□□□ 0.76
ATP6V0A1Q93050 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATP6V0A1Q93050 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATP6V0A1Q93050 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
ATP6V0A1Q93050 BX276092.7-203ENST00000637198 1536 ntBASIC19.8■□□□□ 0.76
ATP6V0A1Q93050 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATP6V0A1Q93050 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATP6V0A1Q93050 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.8■□□□□ 0.76
ATP6V0A1Q93050 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATP6V0A1Q93050 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.8■□□□□ 0.76
ATP6V0A1Q93050 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ATP6V0A1Q93050 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ATP6V0A1Q93050 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATP6V0A1Q93050 PMS2P7-201ENST00000506558 1336 ntBASIC19.79■□□□□ 0.76
ATP6V0A1Q93050 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATP6V0A1Q93050 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATP6V0A1Q93050 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATP6V0A1Q93050 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ATP6V0A1Q93050 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
ATP6V0A1Q93050 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ATP6V0A1Q93050 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.79■□□□□ 0.76
ATP6V0A1Q93050 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ATP6V0A1Q93050 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
ATP6V0A1Q93050 CSF3-203ENST00000394148 622 ntTSL 3 BASIC19.79■□□□□ 0.76
ATP6V0A1Q93050 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATP6V0A1Q93050 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.79■□□□□ 0.76
ATP6V0A1Q93050 AC139530.3-201ENST00000620344 690 ntBASIC19.79■□□□□ 0.76
ATP6V0A1Q93050 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.79■□□□□ 0.76
ATP6V0A1Q93050 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.79■□□□□ 0.76
ATP6V0A1Q93050 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATP6V0A1Q93050 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.79■□□□□ 0.76
ATP6V0A1Q93050 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ATP6V0A1Q93050 HLA-J-201ENST00000462773 1622 ntBASIC19.79■□□□□ 0.76
ATP6V0A1Q93050 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
ATP6V0A1Q93050 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATP6V0A1Q93050 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.79■□□□□ 0.76
ATP6V0A1Q93050 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
ATP6V0A1Q93050 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ATP6V0A1Q93050 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms