Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TM9SF4Q92544 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.76■□□□□ 0.27
TM9SF4Q92544 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TM9SF4Q92544 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TM9SF4Q92544 AC004263.2-201ENST00000617183 678 ntBASIC16.76■□□□□ 0.27
TM9SF4Q92544 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.76■□□□□ 0.27
TM9SF4Q92544 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TM9SF4Q92544 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TM9SF4Q92544 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.76■□□□□ 0.27
TM9SF4Q92544 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TM9SF4Q92544 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TM9SF4Q92544 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.76■□□□□ 0.27
TM9SF4Q92544 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TM9SF4Q92544 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TM9SF4Q92544 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TM9SF4Q92544 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TM9SF4Q92544 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TM9SF4Q92544 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
TM9SF4Q92544 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TM9SF4Q92544 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TM9SF4Q92544 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TM9SF4Q92544 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.75■□□□□ 0.27
TM9SF4Q92544 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.75■□□□□ 0.27
TM9SF4Q92544 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TM9SF4Q92544 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TM9SF4Q92544 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.75■□□□□ 0.27
TM9SF4Q92544 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.75■□□□□ 0.27
TM9SF4Q92544 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.75■□□□□ 0.27
TM9SF4Q92544 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.75■□□□□ 0.27
TM9SF4Q92544 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.75■□□□□ 0.27
TM9SF4Q92544 GPALPP1-207ENST00000611650 899 ntBASIC16.75■□□□□ 0.27
TM9SF4Q92544 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TM9SF4Q92544 BX640515.1-201ENST00000617215 977 ntBASIC16.75■□□□□ 0.27
TM9SF4Q92544 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TM9SF4Q92544 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.75■□□□□ 0.27
TM9SF4Q92544 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TM9SF4Q92544 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.75■□□□□ 0.27
TM9SF4Q92544 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.75■□□□□ 0.27
TM9SF4Q92544 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.75■□□□□ 0.27
TM9SF4Q92544 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TM9SF4Q92544 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TM9SF4Q92544 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
TM9SF4Q92544 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TM9SF4Q92544 AC009102.3-201ENST00000623118 1491 ntBASIC16.74■□□□□ 0.27
TM9SF4Q92544 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TM9SF4Q92544 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TM9SF4Q92544 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TM9SF4Q92544 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TM9SF4Q92544 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
TM9SF4Q92544 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TM9SF4Q92544 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TM9SF4Q92544 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TM9SF4Q92544 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TM9SF4Q92544 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.74■□□□□ 0.27
TM9SF4Q92544 TSPY12P-201ENST00000421279 868 ntBASIC16.74■□□□□ 0.27
TM9SF4Q92544 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TM9SF4Q92544 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.74■□□□□ 0.27
TM9SF4Q92544 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.74■□□□□ 0.27
TM9SF4Q92544 AF186996.4-201ENST00000467186 377 ntBASIC16.74■□□□□ 0.27
TM9SF4Q92544 AC096582.2-201ENST00000510860 516 ntBASIC16.74■□□□□ 0.27
TM9SF4Q92544 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.74■□□□□ 0.27
TM9SF4Q92544 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.74■□□□□ 0.27
TM9SF4Q92544 AP001005.1-201ENST00000571755 1248 ntBASIC16.74■□□□□ 0.27
TM9SF4Q92544 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TM9SF4Q92544 AC120114.3-201ENST00000611923 658 ntBASIC16.74■□□□□ 0.27
TM9SF4Q92544 AL773604.1-201ENST00000617417 272 ntBASIC16.74■□□□□ 0.27
TM9SF4Q92544 AC114341.1-201ENST00000618070 349 ntBASIC16.74■□□□□ 0.27
TM9SF4Q92544 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TM9SF4Q92544 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TM9SF4Q92544 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TM9SF4Q92544 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.74■□□□□ 0.27
TM9SF4Q92544 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TM9SF4Q92544 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TM9SF4Q92544 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.74■□□□□ 0.27
TM9SF4Q92544 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
TM9SF4Q92544 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TM9SF4Q92544 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TM9SF4Q92544 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.74■□□□□ 0.27
TM9SF4Q92544 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
TM9SF4Q92544 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TM9SF4Q92544 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TM9SF4Q92544 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TM9SF4Q92544 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TM9SF4Q92544 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TM9SF4Q92544 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TM9SF4Q92544 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TM9SF4Q92544 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TM9SF4Q92544 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TM9SF4Q92544 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TM9SF4Q92544 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TM9SF4Q92544 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.73■□□□□ 0.27
TM9SF4Q92544 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TM9SF4Q92544 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TM9SF4Q92544 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.73■□□□□ 0.27
TM9SF4Q92544 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TM9SF4Q92544 PRORSD1P-202ENST00000563365 2154 ntBASIC16.73■□□□□ 0.27
TM9SF4Q92544 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TM9SF4Q92544 AKR1C7P-201ENST00000305623 895 ntBASIC16.73■□□□□ 0.27
TM9SF4Q92544 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TM9SF4Q92544 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms