Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SCG3Q8WXD2 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.19■□□□□ 0.5
SCG3Q8WXD2 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
SCG3Q8WXD2 AL450487.1-201ENST00000426799 995 ntBASIC18.19■□□□□ 0.5
SCG3Q8WXD2 HLA-F-220ENST00000434407 884 ntBASIC18.19■□□□□ 0.5
SCG3Q8WXD2 TSSC2-201ENST00000450217 709 ntBASIC18.19■□□□□ 0.5
SCG3Q8WXD2 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCG3Q8WXD2 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.19■□□□□ 0.5
SCG3Q8WXD2 CLEC4GP1-201ENST00000596555 870 ntBASIC18.19■□□□□ 0.5
SCG3Q8WXD2 AC092329.2-201ENST00000598402 547 ntBASIC18.19■□□□□ 0.5
SCG3Q8WXD2 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SCG3Q8WXD2 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SCG3Q8WXD2 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCG3Q8WXD2 AL391807.1-203ENST00000604392 2365 ntBASIC18.19■□□□□ 0.5
SCG3Q8WXD2 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCG3Q8WXD2 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.19■□□□□ 0.5
SCG3Q8WXD2 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCG3Q8WXD2 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCG3Q8WXD2 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCG3Q8WXD2 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCG3Q8WXD2 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.19■□□□□ 0.5
SCG3Q8WXD2 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCG3Q8WXD2 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCG3Q8WXD2 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.18■□□□□ 0.5
SCG3Q8WXD2 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCG3Q8WXD2 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.18■□□□□ 0.5
SCG3Q8WXD2 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCG3Q8WXD2 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SCG3Q8WXD2 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SCG3Q8WXD2 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SCG3Q8WXD2 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SCG3Q8WXD2 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCG3Q8WXD2 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCG3Q8WXD2 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.18■□□□□ 0.5
SCG3Q8WXD2 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.18■□□□□ 0.5
SCG3Q8WXD2 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.18■□□□□ 0.5
SCG3Q8WXD2 AL691432.3-201ENST00000621860 400 ntBASIC18.18■□□□□ 0.5
SCG3Q8WXD2 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.18■□□□□ 0.5
SCG3Q8WXD2 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
SCG3Q8WXD2 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.18■□□□□ 0.5
SCG3Q8WXD2 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.18■□□□□ 0.5
SCG3Q8WXD2 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SCG3Q8WXD2 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SCG3Q8WXD2 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.18■□□□□ 0.5
SCG3Q8WXD2 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCG3Q8WXD2 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCG3Q8WXD2 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SCG3Q8WXD2 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCG3Q8WXD2 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.18■□□□□ 0.5
SCG3Q8WXD2 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCG3Q8WXD2 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
SCG3Q8WXD2 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SCG3Q8WXD2 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
SCG3Q8WXD2 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SCG3Q8WXD2 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCG3Q8WXD2 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCG3Q8WXD2 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCG3Q8WXD2 AL096828.2-201ENST00000567259 1965 ntBASIC18.17■□□□□ 0.5
SCG3Q8WXD2 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
SCG3Q8WXD2 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.17■□□□□ 0.5
SCG3Q8WXD2 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SCG3Q8WXD2 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SCG3Q8WXD2 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCG3Q8WXD2 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCG3Q8WXD2 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCG3Q8WXD2 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.17■□□□□ 0.5
SCG3Q8WXD2 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCG3Q8WXD2 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCG3Q8WXD2 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.17■□□□□ 0.5
SCG3Q8WXD2 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCG3Q8WXD2 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
SCG3Q8WXD2 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.17■□□□□ 0.5
SCG3Q8WXD2 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SCG3Q8WXD2 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCG3Q8WXD2 KRT8P26-201ENST00000534154 1276 ntBASIC18.17■□□□□ 0.5
SCG3Q8WXD2 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.17■□□□□ 0.5
SCG3Q8WXD2 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.17■□□□□ 0.5
SCG3Q8WXD2 AC012317.2-201ENST00000623305 2251 ntBASIC18.17■□□□□ 0.5
SCG3Q8WXD2 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.17■□□□□ 0.5
SCG3Q8WXD2 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
SCG3Q8WXD2 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.17■□□□□ 0.5
SCG3Q8WXD2 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.17■□□□□ 0.5
SCG3Q8WXD2 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.17■□□□□ 0.5
SCG3Q8WXD2 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SCG3Q8WXD2 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.17■□□□□ 0.5
SCG3Q8WXD2 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.17■□□□□ 0.5
SCG3Q8WXD2 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.16■□□□□ 0.5
SCG3Q8WXD2 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
SCG3Q8WXD2 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCG3Q8WXD2 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCG3Q8WXD2 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SCG3Q8WXD2 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCG3Q8WXD2 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
SCG3Q8WXD2 AL024508.2-201ENST00000607749 1894 ntBASIC18.16■□□□□ 0.5
SCG3Q8WXD2 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCG3Q8WXD2 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SCG3Q8WXD2 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SCG3Q8WXD2 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.16■□□□□ 0.5
SCG3Q8WXD2 MIR662-201ENST00000384847 95 ntBASIC18.16■□□□□ 0.5
SCG3Q8WXD2 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms