Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
TMC1Q8TDI8 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC24.66■■□□□ 1.54
TMC1Q8TDI8 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
TMC1Q8TDI8 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TMC1Q8TDI8 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
TMC1Q8TDI8 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TMC1Q8TDI8 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TMC1Q8TDI8 AL590627.1-203ENST00000421194 1026 ntBASIC24.66■■□□□ 1.54
TMC1Q8TDI8 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC24.66■■□□□ 1.54
TMC1Q8TDI8 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
TMC1Q8TDI8 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TMC1Q8TDI8 NOC2LP2-201ENST00000407594 1944 ntBASIC24.66■■□□□ 1.54
TMC1Q8TDI8 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
TMC1Q8TDI8 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TMC1Q8TDI8 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
TMC1Q8TDI8 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
TMC1Q8TDI8 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TMC1Q8TDI8 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TMC1Q8TDI8 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TMC1Q8TDI8 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
TMC1Q8TDI8 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
TMC1Q8TDI8 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
TMC1Q8TDI8 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
TMC1Q8TDI8 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
TMC1Q8TDI8 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
TMC1Q8TDI8 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
TMC1Q8TDI8 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC24.65■■□□□ 1.54
TMC1Q8TDI8 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
TMC1Q8TDI8 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TMC1Q8TDI8 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC24.65■■□□□ 1.54
TMC1Q8TDI8 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TMC1Q8TDI8 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC24.65■■□□□ 1.54
TMC1Q8TDI8 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
TMC1Q8TDI8 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC24.65■■□□□ 1.54
TMC1Q8TDI8 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC24.65■■□□□ 1.54
TMC1Q8TDI8 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TMC1Q8TDI8 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
TMC1Q8TDI8 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC24.65■■□□□ 1.54
TMC1Q8TDI8 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC24.65■■□□□ 1.54
TMC1Q8TDI8 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
TMC1Q8TDI8 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
TMC1Q8TDI8 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
TMC1Q8TDI8 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC24.65■■□□□ 1.54
TMC1Q8TDI8 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC24.64■■□□□ 1.54
TMC1Q8TDI8 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
TMC1Q8TDI8 AC068880.1-201ENST00000507289 2297 ntBASIC24.64■■□□□ 1.54
TMC1Q8TDI8 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
TMC1Q8TDI8 AC010460.3-201ENST00000511359 1579 ntBASIC24.64■■□□□ 1.54
TMC1Q8TDI8 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
TMC1Q8TDI8 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
TMC1Q8TDI8 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.54
TMC1Q8TDI8 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC24.64■■□□□ 1.54
TMC1Q8TDI8 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC24.64■■□□□ 1.54
TMC1Q8TDI8 AL049840.3-201ENST00000602669 611 ntBASIC24.64■■□□□ 1.54
TMC1Q8TDI8 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC24.64■■□□□ 1.54
TMC1Q8TDI8 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
TMC1Q8TDI8 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC24.64■■□□□ 1.53
TMC1Q8TDI8 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
TMC1Q8TDI8 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC24.64■■□□□ 1.53
TMC1Q8TDI8 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
TMC1Q8TDI8 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
TMC1Q8TDI8 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC24.64■■□□□ 1.53
TMC1Q8TDI8 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC24.64■■□□□ 1.53
TMC1Q8TDI8 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC24.64■■□□□ 1.53
TMC1Q8TDI8 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
TMC1Q8TDI8 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
TMC1Q8TDI8 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
TMC1Q8TDI8 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
TMC1Q8TDI8 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
TMC1Q8TDI8 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC24.63■■□□□ 1.53
TMC1Q8TDI8 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC24.63■■□□□ 1.53
TMC1Q8TDI8 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC24.63■■□□□ 1.53
TMC1Q8TDI8 FAM220CP-201ENST00000395253 831 ntBASIC24.63■■□□□ 1.53
TMC1Q8TDI8 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
TMC1Q8TDI8 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC24.63■■□□□ 1.53
TMC1Q8TDI8 HNRNPDP1-201ENST00000439535 754 ntBASIC24.63■■□□□ 1.53
TMC1Q8TDI8 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC24.63■■□□□ 1.53
TMC1Q8TDI8 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC24.63■■□□□ 1.53
TMC1Q8TDI8 AC073648.2-201ENST00000510116 352 ntBASIC24.63■■□□□ 1.53
TMC1Q8TDI8 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC24.63■■□□□ 1.53
TMC1Q8TDI8 SART3-203ENST00000546611 1184 ntBASIC24.63■■□□□ 1.53
TMC1Q8TDI8 PAM16-208ENST00000573553 722 ntTSL 2 BASIC24.63■■□□□ 1.53
TMC1Q8TDI8 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC24.63■■□□□ 1.53
TMC1Q8TDI8 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
TMC1Q8TDI8 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
TMC1Q8TDI8 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC24.63■■□□□ 1.53
TMC1Q8TDI8 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
TMC1Q8TDI8 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
TMC1Q8TDI8 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
TMC1Q8TDI8 AR-207ENST00000612010 3896 ntTSL 5 BASIC24.62■■□□□ 1.53
TMC1Q8TDI8 AC097374.2-201ENST00000618617 1306 ntBASIC24.62■■□□□ 1.53
TMC1Q8TDI8 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
TMC1Q8TDI8 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
TMC1Q8TDI8 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
TMC1Q8TDI8 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
TMC1Q8TDI8 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC24.62■■□□□ 1.53
TMC1Q8TDI8 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
TMC1Q8TDI8 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC24.62■■□□□ 1.53
TMC1Q8TDI8 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
TMC1Q8TDI8 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms