Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 IGHV3-47-201ENST00000425060 335 ntBASIC20.45■□□□□ 0.86
CCDC148Q8NFR7 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC148Q8NFR7 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC148Q8NFR7 MINOS1P3-201ENST00000457048 203 ntBASIC20.45■□□□□ 0.86
CCDC148Q8NFR7 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC20.45■□□□□ 0.86
CCDC148Q8NFR7 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.45■□□□□ 0.86
CCDC148Q8NFR7 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.45■□□□□ 0.86
CCDC148Q8NFR7 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.45■□□□□ 0.86
CCDC148Q8NFR7 AC009533.2-201ENST00000543664 586 ntBASIC20.45■□□□□ 0.86
CCDC148Q8NFR7 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.45■□□□□ 0.86
CCDC148Q8NFR7 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC148Q8NFR7 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.45■□□□□ 0.86
CCDC148Q8NFR7 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC148Q8NFR7 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CCDC148Q8NFR7 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC148Q8NFR7 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC148Q8NFR7 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
CCDC148Q8NFR7 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CCDC148Q8NFR7 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CCDC148Q8NFR7 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CCDC148Q8NFR7 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC148Q8NFR7 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC148Q8NFR7 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CCDC148Q8NFR7 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC148Q8NFR7 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.44■□□□□ 0.86
CCDC148Q8NFR7 GNAS-203ENST00000306120 1878 ntBASIC20.44■□□□□ 0.86
CCDC148Q8NFR7 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC20.44■□□□□ 0.86
CCDC148Q8NFR7 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC148Q8NFR7 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC148Q8NFR7 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CCDC148Q8NFR7 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC148Q8NFR7 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.44■□□□□ 0.86
CCDC148Q8NFR7 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.44■□□□□ 0.86
CCDC148Q8NFR7 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.44■□□□□ 0.86
CCDC148Q8NFR7 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC20.44■□□□□ 0.86
CCDC148Q8NFR7 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC20.44■□□□□ 0.86
CCDC148Q8NFR7 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CCDC148Q8NFR7 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC148Q8NFR7 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC148Q8NFR7 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CCDC148Q8NFR7 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC148Q8NFR7 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC148Q8NFR7 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC148Q8NFR7 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.44■□□□□ 0.86
CCDC148Q8NFR7 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.44■□□□□ 0.86
CCDC148Q8NFR7 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.44■□□□□ 0.86
CCDC148Q8NFR7 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.44■□□□□ 0.86
CCDC148Q8NFR7 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC148Q8NFR7 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.44■□□□□ 0.86
CCDC148Q8NFR7 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
CCDC148Q8NFR7 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC20.43■□□□□ 0.86
CCDC148Q8NFR7 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC148Q8NFR7 AC012317.2-201ENST00000623305 2251 ntBASIC20.43■□□□□ 0.86
CCDC148Q8NFR7 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
CCDC148Q8NFR7 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC148Q8NFR7 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC148Q8NFR7 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
CCDC148Q8NFR7 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC148Q8NFR7 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
CCDC148Q8NFR7 AC007967.3-201ENST00000434308 558 ntBASIC20.43■□□□□ 0.86
CCDC148Q8NFR7 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC148Q8NFR7 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.43■□□□□ 0.86
CCDC148Q8NFR7 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.43■□□□□ 0.86
CCDC148Q8NFR7 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC148Q8NFR7 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC148Q8NFR7 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CCDC148Q8NFR7 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC148Q8NFR7 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC148Q8NFR7 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC148Q8NFR7 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.43■□□□□ 0.86
CCDC148Q8NFR7 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
CCDC148Q8NFR7 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC148Q8NFR7 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC148Q8NFR7 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC148Q8NFR7 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC148Q8NFR7 AC010460.3-201ENST00000511359 1579 ntBASIC20.42■□□□□ 0.86
CCDC148Q8NFR7 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC148Q8NFR7 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC148Q8NFR7 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC148Q8NFR7 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC148Q8NFR7 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC148Q8NFR7 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.42■□□□□ 0.86
CCDC148Q8NFR7 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.42■□□□□ 0.86
CCDC148Q8NFR7 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC148Q8NFR7 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC148Q8NFR7 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.42■□□□□ 0.86
CCDC148Q8NFR7 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC148Q8NFR7 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC148Q8NFR7 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.42■□□□□ 0.86
CCDC148Q8NFR7 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.42■□□□□ 0.86
CCDC148Q8NFR7 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.42■□□□□ 0.86
CCDC148Q8NFR7 FZD10-202ENST00000539839 3282 ntBASIC20.42■□□□□ 0.86
CCDC148Q8NFR7 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC148Q8NFR7 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC148Q8NFR7 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CCDC148Q8NFR7 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC148Q8NFR7 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC148Q8NFR7 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.42■□□□□ 0.86
CCDC148Q8NFR7 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.42■□□□□ 0.86
CCDC148Q8NFR7 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms