Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPEB3Q8NE35 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPEB3Q8NE35 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CPEB3Q8NE35 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
CPEB3Q8NE35 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPEB3Q8NE35 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPEB3Q8NE35 AR-207ENST00000612010 3896 ntTSL 5 BASIC15.53■□□□□ 0.08
CPEB3Q8NE35 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CPEB3Q8NE35 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPEB3Q8NE35 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CPEB3Q8NE35 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.53■□□□□ 0.08
CPEB3Q8NE35 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPEB3Q8NE35 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CPEB3Q8NE35 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.53■□□□□ 0.08
CPEB3Q8NE35 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPEB3Q8NE35 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPEB3Q8NE35 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CPEB3Q8NE35 KRT18P1-202ENST00000452408 1331 ntBASIC15.53■□□□□ 0.08
CPEB3Q8NE35 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CPEB3Q8NE35 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPEB3Q8NE35 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CPEB3Q8NE35 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CPEB3Q8NE35 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CPEB3Q8NE35 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
CPEB3Q8NE35 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPEB3Q8NE35 AC011840.4-201ENST00000578471 627 ntBASIC15.53■□□□□ 0.08
CPEB3Q8NE35 AC069148.1-201ENST00000608741 768 ntBASIC15.53■□□□□ 0.08
CPEB3Q8NE35 AC116407.2-201ENST00000613639 860 ntBASIC15.53■□□□□ 0.08
CPEB3Q8NE35 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.53■□□□□ 0.08
CPEB3Q8NE35 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.53■□□□□ 0.08
CPEB3Q8NE35 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
CPEB3Q8NE35 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPEB3Q8NE35 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPEB3Q8NE35 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CPEB3Q8NE35 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CPEB3Q8NE35 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CPEB3Q8NE35 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPEB3Q8NE35 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CPEB3Q8NE35 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.53■□□□□ 0.08
CPEB3Q8NE35 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CPEB3Q8NE35 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CPEB3Q8NE35 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.52■□□□□ 0.08
CPEB3Q8NE35 GNAS-203ENST00000306120 1878 ntBASIC15.52■□□□□ 0.08
CPEB3Q8NE35 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC15.52■□□□□ 0.08
CPEB3Q8NE35 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CPEB3Q8NE35 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
CPEB3Q8NE35 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CPEB3Q8NE35 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CPEB3Q8NE35 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CPEB3Q8NE35 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CPEB3Q8NE35 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CPEB3Q8NE35 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CPEB3Q8NE35 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CPEB3Q8NE35 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CPEB3Q8NE35 UPK3BP1-201ENST00000428678 509 ntBASIC15.52■□□□□ 0.08
CPEB3Q8NE35 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.52■□□□□ 0.08
CPEB3Q8NE35 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.52■□□□□ 0.08
CPEB3Q8NE35 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CPEB3Q8NE35 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.52■□□□□ 0.08
CPEB3Q8NE35 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CPEB3Q8NE35 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC15.52■□□□□ 0.08
CPEB3Q8NE35 MIR3180-1-201ENST00000580374 94 ntBASIC15.52■□□□□ 0.08
CPEB3Q8NE35 MIR3180-3-201ENST00000584616 94 ntBASIC15.52■□□□□ 0.08
CPEB3Q8NE35 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
CPEB3Q8NE35 AP002414.4-201ENST00000589764 1148 ntBASIC15.52■□□□□ 0.08
CPEB3Q8NE35 NPAP1P7-201ENST00000613027 823 ntBASIC15.52■□□□□ 0.08
CPEB3Q8NE35 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.52■□□□□ 0.08
CPEB3Q8NE35 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
CPEB3Q8NE35 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CPEB3Q8NE35 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CPEB3Q8NE35 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CPEB3Q8NE35 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC15.52■□□□□ 0.07
CPEB3Q8NE35 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CPEB3Q8NE35 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
CPEB3Q8NE35 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
CPEB3Q8NE35 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CPEB3Q8NE35 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CPEB3Q8NE35 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CPEB3Q8NE35 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CPEB3Q8NE35 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.51■□□□□ 0.07
CPEB3Q8NE35 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPEB3Q8NE35 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPEB3Q8NE35 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.51■□□□□ 0.07
CPEB3Q8NE35 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.51■□□□□ 0.07
CPEB3Q8NE35 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPEB3Q8NE35 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CPEB3Q8NE35 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPEB3Q8NE35 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
CPEB3Q8NE35 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPEB3Q8NE35 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPEB3Q8NE35 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPEB3Q8NE35 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CPEB3Q8NE35 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CPEB3Q8NE35 PPIH-202ENST00000372549 327 ntTSL 3 BASIC15.51■□□□□ 0.07
CPEB3Q8NE35 DRAXINP1-201ENST00000437611 948 ntBASIC15.51■□□□□ 0.07
CPEB3Q8NE35 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CPEB3Q8NE35 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.51■□□□□ 0.07
CPEB3Q8NE35 AC091607.1-201ENST00000490318 1060 ntBASIC15.51■□□□□ 0.07
CPEB3Q8NE35 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CPEB3Q8NE35 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms