Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP38Q8NB14 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP38Q8NB14 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
USP38Q8NB14 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP38Q8NB14 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19.79■□□□□ 0.76
USP38Q8NB14 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
USP38Q8NB14 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.79■□□□□ 0.76
USP38Q8NB14 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP38Q8NB14 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
USP38Q8NB14 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
USP38Q8NB14 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP38Q8NB14 AC125634.1-201ENST00000438758 1403 ntBASIC19.78■□□□□ 0.76
USP38Q8NB14 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.78■□□□□ 0.76
USP38Q8NB14 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.78■□□□□ 0.76
USP38Q8NB14 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.78■□□□□ 0.76
USP38Q8NB14 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP38Q8NB14 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
USP38Q8NB14 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.78■□□□□ 0.76
USP38Q8NB14 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP38Q8NB14 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.78■□□□□ 0.76
USP38Q8NB14 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.78■□□□□ 0.76
USP38Q8NB14 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.78■□□□□ 0.76
USP38Q8NB14 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.78■□□□□ 0.76
USP38Q8NB14 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.78■□□□□ 0.76
USP38Q8NB14 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.78■□□□□ 0.76
USP38Q8NB14 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP38Q8NB14 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
USP38Q8NB14 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19.78■□□□□ 0.76
USP38Q8NB14 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC19.78■□□□□ 0.76
USP38Q8NB14 MIR3687-2-201ENST00000577708 61 ntBASIC19.78■□□□□ 0.76
USP38Q8NB14 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
USP38Q8NB14 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC19.78■□□□□ 0.76
USP38Q8NB14 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP38Q8NB14 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC19.78■□□□□ 0.76
USP38Q8NB14 MIR3687-1-201ENST00000614492 61 ntBASIC19.78■□□□□ 0.76
USP38Q8NB14 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP38Q8NB14 LINC00602-201ENST00000629776 2065 ntBASIC19.78■□□□□ 0.76
USP38Q8NB14 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP38Q8NB14 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP38Q8NB14 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
USP38Q8NB14 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
USP38Q8NB14 INTS4P1-201ENST00000438455 1935 ntBASIC19.78■□□□□ 0.76
USP38Q8NB14 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.78■□□□□ 0.76
USP38Q8NB14 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
USP38Q8NB14 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP38Q8NB14 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.78■□□□□ 0.76
USP38Q8NB14 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP38Q8NB14 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP38Q8NB14 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP38Q8NB14 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP38Q8NB14 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
USP38Q8NB14 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.77■□□□□ 0.76
USP38Q8NB14 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.77■□□□□ 0.76
USP38Q8NB14 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC19.77■□□□□ 0.76
USP38Q8NB14 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.77■□□□□ 0.76
USP38Q8NB14 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.77■□□□□ 0.76
USP38Q8NB14 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
USP38Q8NB14 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.77■□□□□ 0.76
USP38Q8NB14 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.77■□□□□ 0.76
USP38Q8NB14 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP38Q8NB14 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
USP38Q8NB14 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP38Q8NB14 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP38Q8NB14 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
USP38Q8NB14 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.77■□□□□ 0.76
USP38Q8NB14 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP38Q8NB14 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
USP38Q8NB14 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
USP38Q8NB14 KRT18P28-201ENST00000453838 1332 ntBASIC19.76■□□□□ 0.75
USP38Q8NB14 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
USP38Q8NB14 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
USP38Q8NB14 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
USP38Q8NB14 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
USP38Q8NB14 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
USP38Q8NB14 AC008764.6-201ENST00000595909 2069 ntBASIC19.76■□□□□ 0.75
USP38Q8NB14 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
USP38Q8NB14 AC020916.1-201ENST00000587762 1774 ntBASIC19.76■□□□□ 0.75
USP38Q8NB14 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
USP38Q8NB14 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
USP38Q8NB14 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
USP38Q8NB14 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
USP38Q8NB14 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.76■□□□□ 0.75
USP38Q8NB14 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
USP38Q8NB14 IGHV3-22-201ENST00000520721 359 ntBASIC19.76■□□□□ 0.75
USP38Q8NB14 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.76■□□□□ 0.75
USP38Q8NB14 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
USP38Q8NB14 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
USP38Q8NB14 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
USP38Q8NB14 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
USP38Q8NB14 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
USP38Q8NB14 LINC01126-201ENST00000623515 1646 ntBASIC19.76■□□□□ 0.75
USP38Q8NB14 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
USP38Q8NB14 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.76■□□□□ 0.75
USP38Q8NB14 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
USP38Q8NB14 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
USP38Q8NB14 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
USP38Q8NB14 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
USP38Q8NB14 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.75■□□□□ 0.75
USP38Q8NB14 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
USP38Q8NB14 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms