Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
C3orf56Q8N813 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
C3orf56Q8N813 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC13.85□□□□□ -0.19
C3orf56Q8N813 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC13.85□□□□□ -0.19
C3orf56Q8N813 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
C3orf56Q8N813 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
C3orf56Q8N813 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
C3orf56Q8N813 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
C3orf56Q8N813 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
C3orf56Q8N813 MTMR9LP-203ENST00000426597 1545 ntBASIC13.85□□□□□ -0.19
C3orf56Q8N813 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
C3orf56Q8N813 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
C3orf56Q8N813 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
C3orf56Q8N813 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC13.84□□□□□ -0.19
C3orf56Q8N813 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
C3orf56Q8N813 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
C3orf56Q8N813 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
C3orf56Q8N813 PMPCAP1-201ENST00000508114 1576 ntBASIC13.84□□□□□ -0.19
C3orf56Q8N813 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC13.84□□□□□ -0.19
C3orf56Q8N813 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
C3orf56Q8N813 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC13.84□□□□□ -0.19
C3orf56Q8N813 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
C3orf56Q8N813 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
C3orf56Q8N813 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
C3orf56Q8N813 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
C3orf56Q8N813 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
C3orf56Q8N813 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
C3orf56Q8N813 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
C3orf56Q8N813 AC007967.3-201ENST00000434308 558 ntBASIC13.84□□□□□ -0.19
C3orf56Q8N813 NKTR-203ENST00000442970 646 ntTSL 2 BASIC13.84□□□□□ -0.19
C3orf56Q8N813 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC13.84□□□□□ -0.19
C3orf56Q8N813 AC108073.2-201ENST00000464002 357 ntBASIC13.84□□□□□ -0.19
C3orf56Q8N813 RNA5SP421-201ENST00000516864 134 ntBASIC13.84□□□□□ -0.19
C3orf56Q8N813 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
C3orf56Q8N813 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC13.84□□□□□ -0.19
C3orf56Q8N813 AL031432.2-201ENST00000566714 459 ntBASIC13.84□□□□□ -0.19
C3orf56Q8N813 AL928711.1-201ENST00000570165 459 ntBASIC13.84□□□□□ -0.19
C3orf56Q8N813 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
C3orf56Q8N813 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
C3orf56Q8N813 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC13.84□□□□□ -0.19
C3orf56Q8N813 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
C3orf56Q8N813 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
C3orf56Q8N813 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
C3orf56Q8N813 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.84□□□□□ -0.19
C3orf56Q8N813 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
C3orf56Q8N813 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
C3orf56Q8N813 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC13.84□□□□□ -0.19
C3orf56Q8N813 AC112907.3-201ENST00000577781 2400 ntBASIC13.84□□□□□ -0.19
C3orf56Q8N813 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
C3orf56Q8N813 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC13.84□□□□□ -0.19
C3orf56Q8N813 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC13.84□□□□□ -0.19
C3orf56Q8N813 AC063926.2-201ENST00000623766 1308 ntBASIC13.84□□□□□ -0.19
C3orf56Q8N813 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
C3orf56Q8N813 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC13.84□□□□□ -0.19
C3orf56Q8N813 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
C3orf56Q8N813 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
C3orf56Q8N813 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
C3orf56Q8N813 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
C3orf56Q8N813 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
C3orf56Q8N813 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
C3orf56Q8N813 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC13.83□□□□□ -0.19
C3orf56Q8N813 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC13.83□□□□□ -0.19
C3orf56Q8N813 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC13.83□□□□□ -0.19
C3orf56Q8N813 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
C3orf56Q8N813 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
C3orf56Q8N813 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
C3orf56Q8N813 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
C3orf56Q8N813 SDHAP2-201ENST00000455183 2001 ntBASIC13.83□□□□□ -0.2
C3orf56Q8N813 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC13.83□□□□□ -0.2
C3orf56Q8N813 AL157384.1-201ENST00000445995 2473 ntBASIC13.83□□□□□ -0.2
C3orf56Q8N813 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
C3orf56Q8N813 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
C3orf56Q8N813 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
C3orf56Q8N813 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
C3orf56Q8N813 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
C3orf56Q8N813 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC13.83□□□□□ -0.2
C3orf56Q8N813 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
C3orf56Q8N813 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
C3orf56Q8N813 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
C3orf56Q8N813 FAM86GP-201ENST00000448322 971 ntBASIC13.83□□□□□ -0.2
C3orf56Q8N813 HCG4B-203ENST00000450128 991 ntBASIC13.83□□□□□ -0.2
C3orf56Q8N813 PUDP-206ENST00000540122 825 ntTSL 2 BASIC13.83□□□□□ -0.2
C3orf56Q8N813 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.83□□□□□ -0.2
C3orf56Q8N813 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.83□□□□□ -0.2
C3orf56Q8N813 AC073592.4-201ENST00000623827 446 ntBASIC13.83□□□□□ -0.2
C3orf56Q8N813 AL035252.4-201ENST00000624174 288 ntBASIC13.83□□□□□ -0.2
C3orf56Q8N813 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
C3orf56Q8N813 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.83□□□□□ -0.2
C3orf56Q8N813 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
C3orf56Q8N813 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
C3orf56Q8N813 OR6D1P-202ENST00000641007 5290 ntBASIC13.83□□□□□ -0.2
C3orf56Q8N813 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
C3orf56Q8N813 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
C3orf56Q8N813 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
C3orf56Q8N813 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
C3orf56Q8N813 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
C3orf56Q8N813 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
C3orf56Q8N813 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
C3orf56Q8N813 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC13.83□□□□□ -0.2
C3orf56Q8N813 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms