Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SYNPOQ8N3V7 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SYNPOQ8N3V7 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SYNPOQ8N3V7 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SYNPOQ8N3V7 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SYNPOQ8N3V7 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.97■□□□□ 0.47
SYNPOQ8N3V7 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SYNPOQ8N3V7 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SYNPOQ8N3V7 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.97■□□□□ 0.47
SYNPOQ8N3V7 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SYNPOQ8N3V7 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SYNPOQ8N3V7 COX5BP2-201ENST00000392354 334 ntBASIC17.97■□□□□ 0.47
SYNPOQ8N3V7 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.97■□□□□ 0.47
SYNPOQ8N3V7 CRYGEP-201ENST00000412192 528 ntBASIC17.97■□□□□ 0.47
SYNPOQ8N3V7 AL020989.1-201ENST00000422979 469 ntBASIC17.97■□□□□ 0.47
SYNPOQ8N3V7 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.97■□□□□ 0.47
SYNPOQ8N3V7 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.97■□□□□ 0.47
SYNPOQ8N3V7 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SYNPOQ8N3V7 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.97■□□□□ 0.47
SYNPOQ8N3V7 AC004706.3-202ENST00000621574 984 ntBASIC17.97■□□□□ 0.47
SYNPOQ8N3V7 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.97■□□□□ 0.47
SYNPOQ8N3V7 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SYNPOQ8N3V7 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SYNPOQ8N3V7 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.97■□□□□ 0.47
SYNPOQ8N3V7 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SYNPOQ8N3V7 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.97■□□□□ 0.47
SYNPOQ8N3V7 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SYNPOQ8N3V7 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.97■□□□□ 0.47
SYNPOQ8N3V7 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SYNPOQ8N3V7 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SYNPOQ8N3V7 AC022898.2-201ENST00000616822 1312 ntBASIC17.97■□□□□ 0.47
SYNPOQ8N3V7 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SYNPOQ8N3V7 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SYNPOQ8N3V7 AC010460.3-201ENST00000511359 1579 ntBASIC17.96■□□□□ 0.47
SYNPOQ8N3V7 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SYNPOQ8N3V7 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
SYNPOQ8N3V7 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SYNPOQ8N3V7 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SYNPOQ8N3V7 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SYNPOQ8N3V7 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SYNPOQ8N3V7 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.96■□□□□ 0.47
SYNPOQ8N3V7 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.96■□□□□ 0.47
SYNPOQ8N3V7 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.96■□□□□ 0.47
SYNPOQ8N3V7 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
SYNPOQ8N3V7 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.96■□□□□ 0.47
SYNPOQ8N3V7 AC073592.5-201ENST00000624854 528 ntBASIC17.96■□□□□ 0.47
SYNPOQ8N3V7 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SYNPOQ8N3V7 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SYNPOQ8N3V7 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SYNPOQ8N3V7 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.96■□□□□ 0.47
SYNPOQ8N3V7 AC090164.3-201ENST00000610780 2143 ntBASIC17.96■□□□□ 0.47
SYNPOQ8N3V7 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
SYNPOQ8N3V7 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SYNPOQ8N3V7 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
SYNPOQ8N3V7 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SYNPOQ8N3V7 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.96■□□□□ 0.46
SYNPOQ8N3V7 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SYNPOQ8N3V7 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SYNPOQ8N3V7 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SYNPOQ8N3V7 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.95■□□□□ 0.46
SYNPOQ8N3V7 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SYNPOQ8N3V7 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.95■□□□□ 0.46
SYNPOQ8N3V7 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.95■□□□□ 0.46
SYNPOQ8N3V7 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SYNPOQ8N3V7 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SYNPOQ8N3V7 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SYNPOQ8N3V7 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SYNPOQ8N3V7 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SYNPOQ8N3V7 AC254562.1-201ENST00000417586 456 ntBASIC17.95■□□□□ 0.46
SYNPOQ8N3V7 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SYNPOQ8N3V7 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.95■□□□□ 0.46
SYNPOQ8N3V7 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SYNPOQ8N3V7 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.95■□□□□ 0.46
SYNPOQ8N3V7 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.95■□□□□ 0.46
SYNPOQ8N3V7 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.95■□□□□ 0.46
SYNPOQ8N3V7 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
SYNPOQ8N3V7 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SYNPOQ8N3V7 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SYNPOQ8N3V7 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SYNPOQ8N3V7 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
SYNPOQ8N3V7 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SYNPOQ8N3V7 KRT18P28-201ENST00000453838 1332 ntBASIC17.95■□□□□ 0.46
SYNPOQ8N3V7 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SYNPOQ8N3V7 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SYNPOQ8N3V7 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SYNPOQ8N3V7 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SYNPOQ8N3V7 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.94■□□□□ 0.46
SYNPOQ8N3V7 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.94■□□□□ 0.46
SYNPOQ8N3V7 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.94■□□□□ 0.46
SYNPOQ8N3V7 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SYNPOQ8N3V7 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.94■□□□□ 0.46
SYNPOQ8N3V7 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.94■□□□□ 0.46
SYNPOQ8N3V7 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.94■□□□□ 0.46
SYNPOQ8N3V7 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SYNPOQ8N3V7 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.94■□□□□ 0.46
SYNPOQ8N3V7 PRSS29P-201ENST00000440800 595 ntBASIC17.94■□□□□ 0.46
SYNPOQ8N3V7 KRT18P2-201ENST00000447938 1258 ntBASIC17.94■□□□□ 0.46
SYNPOQ8N3V7 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SYNPOQ8N3V7 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.94■□□□□ 0.46
SYNPOQ8N3V7 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms