Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
LINC00346Q8IVM7 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LINC00346Q8IVM7 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.73■□□□□ 0.11
LINC00346Q8IVM7 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LINC00346Q8IVM7 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LINC00346Q8IVM7 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LINC00346Q8IVM7 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LINC00346Q8IVM7 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LINC00346Q8IVM7 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LINC00346Q8IVM7 OR6D1P-203ENST00000641209 4860 ntBASIC15.72■□□□□ 0.11
LINC00346Q8IVM7 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.72■□□□□ 0.11
LINC00346Q8IVM7 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.72■□□□□ 0.11
LINC00346Q8IVM7 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
LINC00346Q8IVM7 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.72■□□□□ 0.11
LINC00346Q8IVM7 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
LINC00346Q8IVM7 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.72■□□□□ 0.11
LINC00346Q8IVM7 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LINC00346Q8IVM7 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LINC00346Q8IVM7 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.72■□□□□ 0.11
LINC00346Q8IVM7 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.72■□□□□ 0.11
LINC00346Q8IVM7 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
LINC00346Q8IVM7 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
LINC00346Q8IVM7 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LINC00346Q8IVM7 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.72■□□□□ 0.11
LINC00346Q8IVM7 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
LINC00346Q8IVM7 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC15.72■□□□□ 0.11
LINC00346Q8IVM7 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LINC00346Q8IVM7 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.72■□□□□ 0.11
LINC00346Q8IVM7 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LINC00346Q8IVM7 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.72■□□□□ 0.11
LINC00346Q8IVM7 AC133963.1-201ENST00000504166 1679 ntBASIC15.72■□□□□ 0.11
LINC00346Q8IVM7 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.72■□□□□ 0.11
LINC00346Q8IVM7 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LINC00346Q8IVM7 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
LINC00346Q8IVM7 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LINC00346Q8IVM7 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LINC00346Q8IVM7 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
LINC00346Q8IVM7 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LINC00346Q8IVM7 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LINC00346Q8IVM7 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.71■□□□□ 0.11
LINC00346Q8IVM7 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LINC00346Q8IVM7 IGHGP-201ENST00000390555 1178 ntBASIC15.71■□□□□ 0.11
LINC00346Q8IVM7 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
LINC00346Q8IVM7 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
LINC00346Q8IVM7 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LINC00346Q8IVM7 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.71■□□□□ 0.11
LINC00346Q8IVM7 AC092647.4-201ENST00000457211 535 ntBASIC15.71■□□□□ 0.11
LINC00346Q8IVM7 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC15.71■□□□□ 0.11
LINC00346Q8IVM7 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC15.71■□□□□ 0.11
LINC00346Q8IVM7 VENTXP5-201ENST00000523979 775 ntBASIC15.71■□□□□ 0.11
LINC00346Q8IVM7 PPOX-219ENST00000544598 813 ntTSL 2 BASIC15.71■□□□□ 0.11
LINC00346Q8IVM7 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.71■□□□□ 0.11
LINC00346Q8IVM7 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
LINC00346Q8IVM7 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC15.71■□□□□ 0.11
LINC00346Q8IVM7 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
LINC00346Q8IVM7 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LINC00346Q8IVM7 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
LINC00346Q8IVM7 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LINC00346Q8IVM7 LINC00304-203ENST00000565008 1864 ntBASIC15.71■□□□□ 0.11
LINC00346Q8IVM7 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
LINC00346Q8IVM7 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
LINC00346Q8IVM7 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
LINC00346Q8IVM7 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.71■□□□□ 0.1
LINC00346Q8IVM7 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
LINC00346Q8IVM7 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
LINC00346Q8IVM7 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
LINC00346Q8IVM7 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
LINC00346Q8IVM7 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00346Q8IVM7 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
LINC00346Q8IVM7 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
LINC00346Q8IVM7 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
LINC00346Q8IVM7 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00346Q8IVM7 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00346Q8IVM7 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00346Q8IVM7 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
LINC00346Q8IVM7 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
LINC00346Q8IVM7 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00346Q8IVM7 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.7■□□□□ 0.1
LINC00346Q8IVM7 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00346Q8IVM7 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00346Q8IVM7 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00346Q8IVM7 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00346Q8IVM7 HBZP1-201ENST00000354915 429 ntBASIC15.7■□□□□ 0.1
LINC00346Q8IVM7 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.7■□□□□ 0.1
LINC00346Q8IVM7 HOMER2P1-201ENST00000455653 964 ntBASIC15.7■□□□□ 0.1
LINC00346Q8IVM7 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00346Q8IVM7 RBM42-202ENST00000586618 771 ntTSL 3 BASIC15.7■□□□□ 0.1
LINC00346Q8IVM7 AC009154.2-201ENST00000621177 724 ntBASIC15.7■□□□□ 0.1
LINC00346Q8IVM7 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC15.7■□□□□ 0.1
LINC00346Q8IVM7 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00346Q8IVM7 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00346Q8IVM7 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00346Q8IVM7 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00346Q8IVM7 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
LINC00346Q8IVM7 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.7■□□□□ 0.1
LINC00346Q8IVM7 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.7■□□□□ 0.1
LINC00346Q8IVM7 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.7■□□□□ 0.1
LINC00346Q8IVM7 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00346Q8IVM7 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00346Q8IVM7 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms